RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 PI4KAP42356 2102 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 ABCA7Q8IZY2 2146 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 C2orf78A6NCI8 922 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 MAPK13O15264 365 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 RHOBTB1O94844 696 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 C4BPAP04003 597 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 PFKLP17858 780 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 GALK1P51570 392 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 PSMC1P62191 440 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 RBP5P82980 135 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 SHC2P98077 582 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 ADAM9Q13443 819 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 MAPRE1Q15691 268 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 RNF43Q68DV7 783 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 TCEAL6Q6IPX3 200 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 ARL14EPQ8N8R7 260 aaPredicted RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 TSTD1Q8NFU3 115 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 TMC2Q8TDI7 906 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 SH3RF2Q8TEC5 729 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 KBTBD7Q8WVZ9 684 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 TCEAL3Q969E4 200 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 CEP295NLQ96MC4 621 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 XYLT2Q9H1B5 865 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 DUSP15Q9H1R2 295 aaPredicted RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 FBRSL1Q9HCM7 1045 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 POLR3BQ9NW08 1133 aaPredicted RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 GCNT4Q9P109 453 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 CDH9Q9ULB4 789 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
TPM1-227ENST00000560970 R3HCC1Q9Y3T6 440 aaKnown RBP11.42□□□□□ -0.58
TPM1-227ENST00000560970 ASPMQ8IZT6 3477 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 PSMA7O14818 248 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 TM4SF5O14894 197 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 TRIM66O15016 1216 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 ANXA13P27216 316 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 GBP1P32455 592 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 PSMC2P35998 433 aaKnown RBP11.41□□□□□ -0.58
TPM1-227ENST00000560970 VAMP7P51809 220 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 MYL6P60660 151 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 CREB5Q02930 508 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 LRRC63Q05C16 580 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 PPP3CAQ08209 521 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 NR1H3Q13133 447 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 ZACNQ401N2 412 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 N4BP2L1Q5TBK1 243 aaPredicted RBP11.41□□□□□ -0.58
TPM1-227ENST00000560970 PMS2CLQ68D20 193 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 FAM171BQ6P995 826 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 LIMS2Q7Z4I7 341 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 NELFBQ8WX92 580 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 HPDLQ96IR7 371 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 SPATA17Q96L03 361 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 TSG101Q99816 390 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 NME7Q9Y5B8 376 aa11.41□□□□□ -0.58
TPM1-227ENST00000560970 MYO18AQ92614 2054 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 LNP1A1A4G5 178 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 BCLAF3A2AJT9 711 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 CETN3O15182 167 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 OLFM2O95897 454 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 CYP17A1P05093 508 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 WARSP23381 471 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 OPRD1P41143 372 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 GCLMP48507 274 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 DGKEP52429 567 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 STX17P56962 302 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 BIRC3Q13489 604 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 STIM1Q13586 685 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 PSAPL1Q6NUJ1 521 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 RASSF3Q86WH2 238 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 DHTKD1Q96HY7 919 aaPredicted RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 CNOT6LQ96LI5 555 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 MED15Q96RN5 788 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 LSM14BQ9BX40 385 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 GTPBP4Q9BZE4 634 aaKnown RBP11.4□□□□□ -0.58
TPM1-227ENST00000560970 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 CRTAC1Q9NQ79 661 aa11.4□□□□□ -0.58
TPM1-227ENST00000560970 MAGEC2Q9UBF1 373 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms