RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OLFML3Q9NRN5 406 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 CFAP97Q9P2B7 532 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 STARD13Q9Y3M8 1113 aa19.77■□□□□ 0.76
TPM1-226ENST00000560959 ATXN2Q99700 1313 aaKnown RBP19.76■□□□□ 0.75
TPM1-226ENST00000560959 A0A1W2PQD8 194 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 H3BQV1 296 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 PSMC1P62191 440 aaKnown RBP19.76■□□□□ 0.75
TPM1-226ENST00000560959 FAM193AP78312 1265 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 CYP27A1Q02318 531 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 SURF1Q15526 300 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 LY6G5CQ5SRR4 150 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 ADAMTS14Q8WXS8 1223 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 OVCA2Q8WZ82 227 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 INTS13Q9NVM9 706 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 SMPD4Q9NXE4 827 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 STK17AQ9UEE5 414 aa19.76■□□□□ 0.75
TPM1-226ENST00000560959 HELZP42694 1942 aaKnown RBP19.75■□□□□ 0.75
TPM1-226ENST00000560959 F8VP50 259 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 HOXC11O43248 304 aaPredicted RBP19.75■□□□□ 0.75
TPM1-226ENST00000560959 GABRG2P18507 467 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 GRIN1Q05586 938 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 TAF10Q12962 218 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 TRIP6Q15654 476 aaKnown RBP19.75■□□□□ 0.75
TPM1-226ENST00000560959 BTBD8Q5XKL5 378 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 DYMQ7RTS9 669 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 ZNF513Q8N8E2 541 aaPredicted RBP19.75■□□□□ 0.75
TPM1-226ENST00000560959 PDZD8Q8NEN9 1154 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 DNAJC19Q96DA6 116 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 FAM124BQ9H5Z6 455 aaPredicted RBP19.75■□□□□ 0.75
TPM1-226ENST00000560959 DEC1Q9P2X7 70 aa19.75■□□□□ 0.75
TPM1-226ENST00000560959 TULP1O00294 542 aaPredicted RBP19.74■□□□□ 0.75
TPM1-226ENST00000560959 ZBTB24O43167 697 aaPredicted RBP19.74■□□□□ 0.75
TPM1-226ENST00000560959 TACC1O75410 805 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 GJB3O75712 270 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 ABL1P00519 1130 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 PDGFRBP09619 1106 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 MBL2P11226 248 aaPredicted RBP19.74■□□□□ 0.75
TPM1-226ENST00000560959 NTSR1P30989 418 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 SCAPQ12770 1279 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 DUOXA2Q1HG44 320 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 SNX30Q5VWJ9 437 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 SYCP3Q8IZU3 236 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 GPD1LQ8N335 351 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 ZNF419Q96HQ0 510 aaPredicted RBP19.74■□□□□ 0.75
TPM1-226ENST00000560959 FSCN3Q9NQT6 498 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 CALCOCO1Q9P1Z2 691 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 CCDC39Q9UFE4 941 aa19.74■□□□□ 0.75
TPM1-226ENST00000560959 ITPR1Q14643 2758 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 IGHV1OR15-9A0A0B4J2B8 117 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 GOLGA8IPA6NC78 632 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 GOLGA8JA6NMD2 632 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 GCNT3O95395 438 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 TNNC2P02585 160 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 GNL1P36915 607 aaPredicted RBP19.73■□□□□ 0.75
TPM1-226ENST00000560959 KDSRQ06136 332 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 CCNI2Q6ZMN8 369 aaPredicted RBP19.73■□□□□ 0.75
TPM1-226ENST00000560959 TERB1Q8NA31 727 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 CBWD1Q9BRT8 395 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 ELOVL4Q9GZR5 314 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 SUSD2Q9UGT4 822 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 PCDHB9Q9Y5E1 797 aa19.73■□□□□ 0.75
TPM1-226ENST00000560959 A0A1W2PQF6 199 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 TULP3O75386 442 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 RTN3O95197 1032 aaPredicted RBP19.72■□□□□ 0.75
TPM1-226ENST00000560959 HOXB2P14652 356 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 YWHAQP27348 245 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 TUBP50607 506 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 SOWAHCQ53LP3 525 aaPredicted RBP19.72■□□□□ 0.75
TPM1-226ENST00000560959 SV2BQ7L1I2 683 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 SLC41A1Q8IVJ1 513 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 NUP93Q8N1F7 819 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 DEFB119Q8N690 84 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 OR5B17Q8NGF7 314 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 FAM84AQ96KN4 292 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 ZFRQ96KR1 1074 aaKnown RBP19.72■□□□□ 0.75
TPM1-226ENST00000560959 MMS19Q96T76 1030 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 ZDHHC5Q9C0B5 715 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 SNX25Q9H3E2 840 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 CD248Q9HCU0 757 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 ZDHHC4Q9NPG8 344 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 SPHK2Q9NRA0 654 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 LOC400499M0QZD8 3231 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 PCDH15Q96QU1 1955 aa19.72■□□□□ 0.75
TPM1-226ENST00000560959 SMG1Q96Q15 3661 aaKnown RBP19.71■□□□□ 0.75
TPM1-226ENST00000560959 FRMD3A2A2Y4 597 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 ZNF233A6NK53 670 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SH3BP5O60239 455 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 PTPN1P18031 435 aaKnown RBP19.71■□□□□ 0.75
TPM1-226ENST00000560959 GJB2P29033 226 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 CASP5P51878 434 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
TPM1-226ENST00000560959 MDH1BQ5I0G3 518 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SYCP2LQ5T4T6 812 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 SDE2Q6IQ49 451 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 HS2ST1Q7LGA3 356 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 GLRX5Q86SX6 157 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 PDZD3Q86UT5 571 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 TRIML1Q8N9V2 468 aa19.71■□□□□ 0.75
TPM1-226ENST00000560959 FOXJ1Q92949 421 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms