RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TMEM105Q8N8V8 129 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 TTC16Q8NEE8 873 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 TTC8Q8TAM2 541 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 IRF7Q92985 503 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 VPS16Q9H269 839 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 ACP6Q9NPH0 428 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 GKN1Q9NS71 199 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 OSER1Q9NX31 292 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
USP8-212ENST00000560730 STK25O00506 426 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
USP8-212ENST00000560730 COCHO43405 550 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 GABBR2O75899 941 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 OLFM2O95897 454 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 KRT5P13647 590 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 COL9A1P20849 921 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 MFAP3P55082 362 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 STARD6P59095 220 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 TNK2Q07912 1038 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 USP4Q13107 963 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 CNGA2Q16280 664 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 SNX30Q5VWJ9 437 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
USP8-212ENST00000560730 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 SCD5Q86SK9 330 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 PIGZQ86VD9 579 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 SUGP1Q8IWZ8 645 aaKnown RBP12.75□□□□□ -0.37
USP8-212ENST00000560730 PDZD8Q8NEN9 1154 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 SH3RF2Q8TEC5 729 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 DNASE1L2Q92874 299 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 FUCA2Q9BTY2 467 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 FOXQ1Q9C009 403 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 NMUR1Q9HB89 426 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 APEX2Q9UBZ4 518 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP8-212ENST00000560730 MTF2Q9Y483 593 aaPredicted RBP12.75□□□□□ -0.37
USP8-212ENST00000560730 USP3Q9Y6I4 520 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 ATG2BQ96BY7 2078 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 CACNA1IQ9P0X4 2223 aa12.75□□□□□ -0.37
USP8-212ENST00000560730 A0A1W2PQH9 124 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 ABCB7O75027 752 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 TBX18O95935 607 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 PNMA6AP0CW24 399 aaPredicted RBP12.74□□□□□ -0.37
USP8-212ENST00000560730 ZNF18P17022 549 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 SOX9P48436 509 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 BCAT1P54687 386 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 SLC7A9P82251 487 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 BST2Q10589 180 aaKnown RBP12.74□□□□□ -0.37
USP8-212ENST00000560730 ZNF77Q15935 545 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 HECTD3Q5T447 861 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 SHC3Q92529 594 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 NDRG1Q92597 394 aaKnown RBP12.74□□□□□ -0.37
USP8-212ENST00000560730 FAM83CQ9BQN1 747 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
USP8-212ENST00000560730 UBXN6Q9BZV1 441 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 KIF9Q9HAQ2 790 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 TRPV5Q9NQA5 729 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 SMPD4Q9NXE4 827 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 DNAJC12Q9UKB3 198 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 ARHGAP26Q9UNA1 814 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 CPQQ9Y646 472 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
USP8-212ENST00000560730 SYCE3A1L190 88 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 LEFTY2O00292 366 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 FOXN3O00409 490 aaPredicted RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 SCAMP3O14828 347 aaKnown RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 ARSAP15289 507 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 PFKLP17858 780 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 AOC1P19801 751 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 USP8P40818 1118 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 KLK7P49862 253 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 CLCN5P51795 746 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 PRKCQQ04759 706 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 ENOSF1Q7L5Y1 443 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 CCDC186Q7Z3E2 898 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 WBP2Q969T9 261 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 SHDQ96IW2 340 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
USP8-212ENST00000560730 EBF3Q9H4W6 596 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
USP8-212ENST00000560730 TLR8Q9NR97 1041 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms