RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 COL4A5P29400 1685 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 XRCC5P13010 732 aaKnown RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 SOX5P35711 763 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 ALDH3B2P48448 385 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 PRKD1Q15139 912 aaPredicted RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 SBK1Q52WX2 424 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 STRIP1Q5VSL9 837 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 IZUMO3Q5VZ72 239 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 CCDC138Q96M89 665 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 CCDC68Q9H2F9 335 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 SSU72Q9NP77 194 aaKnown RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 RABGEF1Q9UJ41 708 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 ERVK-11Q9UQG0 969 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 SULT1C4O75897 302 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 POLR2EP19388 210 aaKnown RBP19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 CPOXP36551 454 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 ALDH18A1P54886 795 aaKnown RBP19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 CREB5Q02930 508 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 HP1BP3Q5SSJ5 553 aaPredicted RBP19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 NLGN2Q8NFZ4 835 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 HELQQ8TDG4 1101 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 GRK7Q8WTQ7 553 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 PSMC3IPQ9P2W1 217 aaPredicted RBP19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 EBF1Q9UH73 591 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 PRR5-ARHGAP8B1AHC4 643 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 H3BNX3 289 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 TM9SF1O15321 606 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 CYTH3O43739 400 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A9O60656 530 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A6P19224 532 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A1P22309 533 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A4P22310 534 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A3P35503 534 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A5P35504 534 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 ARHGAP8P85298 464 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A7Q9HAW7 530 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A10Q9HAW8 530 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 UGT1A8Q9HAW9 530 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 SACM1LQ9NTJ5 587 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 GPRC5DQ9NZD1 345 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 GNEQ9Y223 722 aaKnown RBP19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 KIAA1551Q9HCM1 1747 aa19.9■□□□□ 0.78
SEMA4B-215ENST00000560089 GOLGA8RI6L899 631 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 NAT2P11245 290 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 BGNP21810 368 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 PRDX6P30041 224 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 HADHBP55084 474 aaKnown RBP19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 DALRD3Q5D0E6 543 aaKnown RBP19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 CLVS1Q8IUQ0 354 aaPredicted RBP19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 PCYOX1LQ8NBM8 494 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 PSPC1Q8WXF1 523 aaKnown RBP19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 ACP6Q9NPH0 428 aa19.89■□□□□ 0.78
SEMA4B-215ENST00000560089 CHRNB1P11230 501 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 CCDC130P13994 396 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 RALGPS1Q5JS13 557 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 RARS2Q5T160 578 aaKnown RBP19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 MCF2L2Q86YR7 1114 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 RTKN2Q8IZC4 609 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 PQLC1Q8N2U9 271 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 BBOF1Q8ND07 529 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 HPS1Q92902 700 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 TAMM41Q96BW9 452 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 OTUD5Q96G74 571 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 KCNK4Q9NYG8 393 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 CHORDC1Q9UHD1 332 aaPredicted RBP19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 PCDHB2Q9Y5E7 798 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 SQORQ9Y6N5 450 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 CDK5RAP2Q96SN8 1893 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 KRBA1A5PL33 1030 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 PSMD12O00232 456 aaPredicted RBP19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 CHEK2O96017 543 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 MAN1A1P33908 653 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 WASHC5Q12768 1159 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 PUS10Q3MIT2 529 aaKnown RBP19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 XKR5Q6UX68 686 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 FRMD5Q7Z6J6 570 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 DCLK3Q9C098 648 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 KCTD10Q9H3F6 313 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 HERC5Q9UII4 1024 aaKnown RBP19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 POLIQ9UNA4 740 aa19.89■□□□□ 0.77
SEMA4B-215ENST00000560089 KRT75O95678 551 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 CPNE8Q86YQ8 564 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 HSPH1Q92598 858 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 ISOC1Q96CN7 298 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 KLF6Q99612 283 aaPredicted RBP19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 CCDC106Q9BWC9 280 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 RETREG1Q9H6L5 497 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 ZFYVE28Q9HCC9 887 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 IL17RBQ9NRM6 502 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 ZBTB21Q9ULJ3 1066 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 SCAF8Q9UPN6 1271 aaKnown RBP19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 SF3B1O75533 1304 aaKnown RBP eCLIP19.88■□□□□ 0.774e-6■■■■■ 88.1
SEMA4B-215ENST00000560089 CSDE1O75534 798 aaKnown RBP19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 FGRP09769 529 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 PDIA2Q13087 525 aaKnown RBP19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 TBCCQ15814 346 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 TRIM16LQ309B1 348 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
SEMA4B-215ENST00000560089 GPR180Q86V85 440 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms