RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GKN1Q9NS71 199 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 LMBRD1Q9NUN5 540 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 DUS2Q9NX74 493 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 GTSE1Q9NYZ3 720 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 GCNT4Q9P109 453 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 TBC1D14Q9P2M4 693 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 HMGXB4Q9UGU5 601 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CHORDC1Q9UHD1 332 aaPredicted RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 NDRG2Q9UN36 371 aaKnown RBP4.62□□□□□ -1.67
SNX1-205ENST00000559339 SCML2Q9UQR0 700 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 CCL26Q9Y258 94 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 SH3BP1Q9Y3L3 701 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 NME7Q9Y5B8 376 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 NCANO14594 1321 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 C2orf16Q68DN1 1984 aa4.62□□□□□ -1.67
SNX1-205ENST00000559339 ANK1P16157 1881 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 FAM92AA1XBS5 289 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 GTPBP10A4D1E9 387 aaKnown RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 SPECC1L-ADORA2AF8WAN1 911 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 LEFTY2O00292 366 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ARNTLO00327 626 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NRG2O14511 850 aaPredicted RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 TNFRSF10BO14763 440 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 COCHO43405 550 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 MED7O43513 233 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 PI15O43692 258 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TLR5O60602 858 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ATG13O75143 517 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 LRRN2O75325 713 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TADA3O75528 432 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 BEST1O76090 585 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NFATC1O95644 943 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ADH1CP00326 375 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 OAS1P00973 400 aaKnown RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 SETSIPP0DME0 302 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 VDRP11473 427 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 KRT5P13647 590 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TCF3P15923 654 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CD72P21854 359 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CTHP32929 405 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CACNA2D1P54289 1103 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 BCAT1P54687 386 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 RAD23BP54727 409 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NRLP54845 237 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SNX16P57768 344 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SLC7A9P82251 487 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TNK2Q07912 1038 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 BST2Q10589 180 aaKnown RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 ANGPT1Q15389 498 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 EXOC3L4Q17RC7 722 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 DPCR1Q3MIW9 517 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 FBXO43Q4G163 708 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 PREPLQ4J6C6 727 aaPredicted RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 DGKKQ5KSL6 1271 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 FKBP15Q5T1M5 1219 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ARHGAP17Q68EM7 881 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TRIM65Q6PJ69 517 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CLEC20AQ6ZU45 233 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NUDT18Q6ZVK8 323 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 PAQR9Q6ZVX9 377 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 RRAGAQ7L523 313 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SIX6OS1Q8N1H7 587 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SYNPOQ8N3V7 929 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SLC4A11Q8NBS3 891 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 EHBP1Q8NDI1 1231 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TTC8Q8TAM2 541 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 WHAMMQ8TF30 809 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ATRIPQ8WXE1 791 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 GOLGA1Q92805 767 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 OTUB2Q96DC9 234 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ZFYVE19Q96K21 471 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TWNKQ96RR1 684 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SMOQ99835 787 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 FAM83CQ9BQN1 747 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TUBGCP2Q9BSJ2 902 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 FOXQ1Q9C009 403 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 RNF38Q9H0F5 515 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 UBE2TQ9NPD8 197 aaPredicted RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 TMEM30AQ9NV96 361 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 ANO10Q9NW15 660 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 SPATA6Q9NWH7 488 aaPredicted RBP4.61□□□□□ -1.67
SNX1-205ENST00000559339 SMPD4Q9NXE4 827 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CLIC5Q9NZA1 410 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 IL37Q9NZH6 218 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 DNMT3LQ9UJW3 386 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NAGPAQ9UK23 515 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 TSPAN16Q9UKR8 245 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 STRIP2Q9ULQ0 834 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 NFE2L3Q9Y4A8 694 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 PCDHB4Q9Y5E5 795 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 CPQQ9Y646 472 aa4.61□□□□□ -1.67
SNX1-205ENST00000559339 DENND4AQ7Z401 1863 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 WDFY4Q6ZS81 3184 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 MUC6Q6W4X9 2439 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 E2F8A0AVK6 867 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 KCNJ18B7U540 433 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 M0QYV0 167 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 XPO1O14980 1071 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms