RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 SLC6A9P48067 706 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-209ENST00000558861 STAT2P52630 851 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 AK2P54819 239 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 TBX4P57082 545 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 IRX3P78415 501 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-209ENST00000558861 GFOD2Q3B7J2 385 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 ASPRV1Q53RT3 343 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 ATAT1Q5SQI0 421 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 BORAQ6PGQ7 559 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 FAM180AQ6UWF9 173 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 TMTC2Q8N394 836 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 PRR18Q8N4B5 295 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 FBXO18Q8NFZ0 1043 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 SLC35G2Q8TBE7 412 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 MVB12AQ96EY5 273 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 GPHA2Q96T91 129 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 SLF1Q9BQI6 1058 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 PDCD2LQ9BRP1 358 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 ARHGAP39Q9C0H5 1083 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 UBA5Q9GZZ9 404 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 PORCNQ9H237 461 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 RANBP17Q9H2T7 1088 aaKnown RBP6.85□□□□□ -1.31
LRRC28-209ENST00000558861 RIOX1Q9H6W3 641 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 JMJD4Q9H9V9 463 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 HOXC10Q9NYD6 342 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 GABBR1Q9UBS5 961 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 TRPS1Q9UHF7 1281 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 CPA4Q9UI42 421 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 FEM1BQ9UK73 627 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 TPCN1Q9ULQ1 816 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 DNAH12Q6ZR08 3092 aa6.85□□□□□ -1.31
LRRC28-209ENST00000558861 SMCHD1A6NHR9 2005 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 DOCK3Q8IZD9 2030 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 KIAA0100Q14667 2235 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 KLF18A0A0U1RQI7 1052 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 DBX1A6NMT0 343 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 MTSS1O43312 755 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 PHF2O75151 1096 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 ITGA10O75578 1167 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 LARGE1O95461 756 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 JUNP05412 331 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 SMARCA1P28370 1054 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 WNT3AP56704 352 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 TMTC3Q6ZXV5 915 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 FAM160B2Q86V87 743 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 ADGRF4Q8IZF3 695 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 SRBD1Q8N5C6 995 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 ANKRD13CQ8N6S4 541 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 FANCBQ8NB91 859 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 DIS3LQ8TF46 1054 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 CHURC1Q8WUH1 139 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 USP6NLQ92738 828 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 RELTQ969Z4 430 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 SPZ1Q9BXG8 430 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 MOV10L1Q9BXT6 1211 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 SPATC1LQ9H0A9 340 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 LDAHQ9H6V9 325 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 PDRG1Q9NUG6 133 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 OBP2AQ9NY56 170 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 NCDNQ9UBB6 729 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 DDX20Q9UHI6 824 aaKnown RBP6.84□□□□□ -1.31
LRRC28-209ENST00000558861 GJD2Q9UKL4 321 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 CYP46A1Q9Y6A2 500 aa6.84□□□□□ -1.31
LRRC28-209ENST00000558861 ERICH2A1L162 156 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 KLRF2D3W0D1 207 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 SLC26A4O43511 780 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ENDOD1O94919 500 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 CTDNEP1O95476 244 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 PARP1P09874 1014 aaKnown RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ZSCAN22P10073 491 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 GNALP38405 381 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 CASRP41180 1078 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 CTCFP49711 727 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 LBX1P52954 281 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 OAZ1P54368 228 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 RAC3P60763 192 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 SNAP25P60880 206 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 SP3Q02447 781 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 GHRHRQ02643 423 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 DUSP2Q05923 314 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 RABEP1Q15276 862 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ME3Q16798 604 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 CCDC96Q2M329 555 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 PGS1Q32NB8 556 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ARHGAP29Q52LW3 1261 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 MICU3Q86XE3 530 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 RAB11FIP4Q86YS3 637 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 LGI4Q8N135 537 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 PQLC1Q8N2U9 271 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ZBTB34Q8NCN2 500 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 SHCBP1Q8NEM2 672 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms