RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 LRPAP1P30533 357 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 GNA15P30679 374 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 TNFSF9P41273 254 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 TOB1P50616 345 aaPredicted RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 EPHB3P54753 998 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MCL1Q07820 350 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 GNL2Q13823 731 aaKnown RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 PDIA5Q14554 519 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 PON2Q15165 354 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 IL17AQ16552 155 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 LONP2Q86WA8 852 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 RALGPS2Q86X27 583 aaPredicted RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 ARID3BQ8IVW6 561 aaPredicted RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 TTC9Q92623 222 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 TMEM209Q96SK2 561 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 MMTAG2Q9BU76 263 aaKnown RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 GPR88Q9GZN0 384 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 C8orf33Q9H7E9 229 aaPredicted RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 C17orf75Q9HAS0 396 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 RXFP3Q9NSD7 469 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 NOL7Q9UMY1 257 aaKnown RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 DNM3Q9UQ16 869 aa10.47□□□□□ -0.73
SPG11-212ENST00000558790 ASCC3Q8N3C0 2202 aaKnown RBP10.47□□□□□ -0.73
SPG11-212ENST00000558790 OR6C75A6NL08 312 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PLS3P13797 630 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 GABRR2P28476 465 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 CNR2P34972 360 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.73
SPG11-212ENST00000558790 CYP4F8P98187 520 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PPP2R3AQ06190 1150 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 TNK2Q07912 1038 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PSMD2Q13200 908 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 GPR17Q13304 367 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 DGKKQ5KSL6 1271 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 GPR158Q5T848 1215 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 KRT79Q5XKE5 535 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 OVOS1Q6IE37 1185 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 CENPPQ6IPU0 288 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PKN3Q6P5Z2 889 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 ZPBP2Q6X784 338 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 CEP68Q76N32 757 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 USP37Q86T82 979 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 IL22RA1Q8N6P7 574 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PSMG2Q969U7 264 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
SPG11-212ENST00000558790 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
SPG11-212ENST00000558790 PLXND1Q9Y4D7 1925 aa10.46□□□□□ -0.74
SPG11-212ENST00000558790 MYO18AQ92614 2054 aaKnown RBP10.46□□□□□ -0.74
SPG11-212ENST00000558790 GON4LQ3T8J9 2241 aa10.46□□□□□ -0.74
SPG11-212ENST00000558790 MYO18BQ8IUG5 2567 aa10.46□□□□□ -0.74
SPG11-212ENST00000558790 CLDN3O15551 220 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 FAM189A1O60320 539 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 CLTAP09496 248 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 NID1P14543 1247 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 ATF6P18850 670 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 U2AF2P26368 475 aaKnown RBP eCLIP10.45□□□□□ -0.742e-10■■■■■ 39.7
SPG11-212ENST00000558790 ALDH1A3P47895 512 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 CDR1P51861 262 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 MYBPC2Q14324 1141 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 SF3A2Q15428 464 aaKnown RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 ZRSR1Q15695 479 aaKnown RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 ZBTB6Q15916 424 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 ARHGAP29Q52LW3 1261 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 DSTYKQ6XUX3 929 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 DNAJB7Q7Z6W7 309 aaPredicted RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 WDR5BQ86VZ2 330 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 BICD1Q96G01 975 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 LLPHQ9BRT6 129 aaKnown RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 NTPCRQ9BSD7 190 aaKnown RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 MUC3BQ9H195 1237 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 ATXN3LQ9H3M9 355 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 UBQLN1Q9UMX0 589 aaKnown RBP10.45□□□□□ -0.74
SPG11-212ENST00000558790 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 WASF3Q9UPY6 502 aa10.45□□□□□ -0.74
SPG11-212ENST00000558790 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 NPHP3-ACAD11A0A0J9YXS1 232 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 LACTBL1A8MY62 500 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 LAD1O00515 517 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 HNRNPDLO14979 420 aaKnown RBP10.44□□□□□ -0.74
SPG11-212ENST00000558790 EXTL3O43909 919 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 FGF19O95750 216 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 NFICP08651 508 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 ODC1P11926 461 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 TYMPP19971 482 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 CYP3A5P20815 502 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 HOXA6P31267 233 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 PRPHP41219 470 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 PXNP49023 591 aaPredicted RBP10.44□□□□□ -0.74
SPG11-212ENST00000558790 SLC12A3P55017 1021 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 NCKAP1LP55160 1127 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 HMGN5P82970 282 aaKnown RBP10.44□□□□□ -0.74
SPG11-212ENST00000558790 DAB2P98082 770 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 AASDHQ4L235 1098 aaPredicted RBP10.44□□□□□ -0.74
SPG11-212ENST00000558790 ARHGAP15Q53QZ3 475 aa10.44□□□□□ -0.74
SPG11-212ENST00000558790 HYIQ5T013 277 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms