RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 EIF2B4Q9UI10 523 aaKnown RBP12.74□□□□□ -0.37
SMAD3-206ENST00000558739 DSEQ9UL01 958 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 KIAA1024Q9UPX6 916 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 SNX11Q9Y5W9 270 aa12.74□□□□□ -0.37
SMAD3-206ENST00000558739 CAPN8A6NHC0 703 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 WASH3PC4AMC7 463 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 E9PAM4 449 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 E9PMD0 336 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 ADRB2P07550 413 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 JUPP14923 745 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 CD6P30203 668 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
SMAD3-206ENST00000558739 IL12RB1P42701 662 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 TSPY1Q01534 308 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 KCNH2Q12809 1159 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 STRN3Q13033 797 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 TARDBPQ13148 414 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMAD3-206ENST00000558739 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 PDIA5Q14554 519 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 KCNT1Q5JUK3 1230 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 ARHGAP40Q5TG30 622 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 PRICKLE2Q7Z3G6 844 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 TMPRSS12Q86WS5 348 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 CHPFQ8IZ52 775 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 BAP1Q92560 729 aa12.73□□□□□ -0.37
SMAD3-206ENST00000558739 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-206ENST00000558739 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
SMAD3-206ENST00000558739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 FDPSP14324 419 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 GRIK1P39086 918 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 GRK6P43250 576 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 TAF6P49848 677 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 CSRP3P50461 194 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 RPL10AP62906 217 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 SLC7A9P82251 487 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 PREPLQ4J6C6 727 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 HES3Q5TGS1 186 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 ZPBP2Q6X784 338 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 KCNK18Q7Z418 384 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 TRMT11Q7Z4G4 463 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 TTC9Q92623 222 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 WBP2Q969T9 261 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 MKRN2Q9H000 416 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 RPF1Q9H9Y2 349 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 WSB2Q9NYS7 404 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 FTSJ1Q9UET6 329 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 RBM19Q9Y4C8 960 aaKnown RBP12.72□□□□□ -0.37
SMAD3-206ENST00000558739 FBN2P35556 2912 aa12.72□□□□□ -0.37
SMAD3-206ENST00000558739 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 PP2D1A8MPX8 630 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 PRRT4C9JH25 899 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 OLFM2O95897 454 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 XBP1P17861 261 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 RTP5Q14D33 572 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 RINT1Q6NUQ1 792 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 IL27RAQ6UWB1 636 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 FSIP1Q8NA03 581 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 FGF11Q92914 225 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 BICD1Q96G01 975 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 GABRG3Q99928 467 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 CCSER1Q9C0I3 900 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 USP36Q9P275 1121 aaKnown RBP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 DEC1Q9P2X7 70 aa12.71□□□□□ -0.37
SMAD3-206ENST00000558739 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-206ENST00000558739 POLQO75417 2590 aa12.71□□□□□ -0.38
SMAD3-206ENST00000558739 TISP43B9A030 160 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 H0Y8X5 98 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 ATP2C2O75185 946 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
SMAD3-206ENST00000558739 OR52Z1P0C646 297 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 HNF1BP35680 557 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 SF3A1Q15459 793 aaKnown RBP12.7□□□□□ -0.38
SMAD3-206ENST00000558739 FUT11Q495W5 492 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 GATAD2AQ86YP4 633 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 BBS7Q8IWZ6 715 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 DIS3L2Q8IYB7 885 aaKnown RBP12.7□□□□□ -0.38
SMAD3-206ENST00000558739 SNX19Q92543 992 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 LGMNQ99538 433 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms