RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 SESTD1Q86VW0 696 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 NME8Q8N427 588 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 GPATCH11Q8N954 259 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 NAT8LQ8N9F0 302 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 CXorf38Q8TB03 319 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 TEKT4Q8WW24 435 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 PWWP2AQ96N64 755 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 TSPAN18Q96SJ8 248 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 RNPEPQ9H4A4 650 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 FGFR1OP2Q9NVK5 253 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 KLHL14Q9P2G3 628 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.6□□□□□ -1.19
VPS13C-206ENST00000558338 CITO14578 2027 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 EVPLQ92817 2033 aa7.6□□□□□ -1.19
VPS13C-206ENST00000558338 C2CD4BA6NLJ0 364 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 POC1B-GALNT4F8VUJ3 575 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 DNM1LO00429 736 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CHADO15335 359 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 TSPAN1O60635 241 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ENDOD1O94919 500 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ASMTLO95671 621 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 IQCF3P0C7M6 154 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CETPP11597 493 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 HOXD8P13378 290 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ETS1P14921 441 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 SCNN1AP37088 669 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 SKIV2L2P42285 1042 aaKnown RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 NDST1P52848 882 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 YARSP54577 528 aaKnown RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CDH6P55285 790 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CDH8P55286 799 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CBLBQ13191 982 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 KRT81Q14533 505 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 NOMO1Q15155 1222 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 SNCBQ16143 134 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 BOLA3Q53S33 107 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 SCARA3Q6AZY7 606 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 OR6B2Q6IFH4 312 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CYB5D1Q6P9G0 228 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 UNC93AQ86WB7 457 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CDR2LQ86X02 465 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 PALM2Q8IXS6 379 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CYP4X1Q8N118 509 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ARFGAP1Q8N6T3 406 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 LRRC52Q8N7C0 313 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CCDC63Q8NA47 563 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 GLIS1Q8NBF1 620 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 BEST2Q8NFU1 509 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 GDAP1Q8TB36 358 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 MAGEC3Q8TD91 643 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CPT1BQ92523 772 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 HSPH1Q92598 858 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 PMM1Q92871 262 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ACSF2Q96CM8 615 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CPB2Q96IY4 423 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 TWNKQ96RR1 684 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 TINF2Q9BSI4 451 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CALN1Q9BXU9 219 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ACSS3Q9H6R3 686 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 RXFP1Q9HBX9 757 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CYLDQ9NQC7 956 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 PDGFCQ9NRA1 345 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-206ENST00000558338 PAK5Q9P286 719 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 HESX1Q9UBX0 185 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 HMGXB4Q9UGU5 601 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 TSPAN16Q9UKR8 245 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 STARD13Q9Y3M8 1113 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 ZNF236Q9UL36 1845 aa7.59□□□□□ -1.19
VPS13C-206ENST00000558338 CLUHO75153 1309 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 IQANK1A0A1B0GTG1 560 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 H3BRB1 525 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 CHUKO15111 745 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 TM9SF1O15321 606 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 XPOTO43592 962 aaKnown RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 ZNF189O75820 626 aaPredicted RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 ATP5HO75947 161 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 VTNP04004 478 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 CYP2C8P10632 490 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 RBP3P10745 1247 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 CREB1P16220 341 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 PDGFRAP16234 1089 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 ZFXP17010 805 aaPredicted RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 GCAP28676 217 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 ADORA2AP29274 412 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 SDC4P31431 198 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 RPL22P35268 128 aaKnown RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 GRIK4Q16099 956 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 SEPT7Q16181 437 aaKnown RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 PDK4Q16654 411 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 GOLGA7BQ2TAP0 167 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 KCNT1Q5JUK3 1230 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 DARS2Q6PI48 645 aaKnown RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 MAMDC4Q6UXC1 1216 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 FAM183BPQ6ZVS7 135 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 PRUNE1Q86TP1 453 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
VPS13C-206ENST00000558338 FUKQ8N0W3 1084 aa7.58□□□□□ -1.2
VPS13C-206ENST00000558338 EMC1Q8N766 993 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms