RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LHX5Q9H2C1 402 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 KCNK12Q9HB15 430 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ZNF638Q14966 1978 aaKnown RBP26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ANHXE9PGG2 379 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ASGR2P07307 311 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 USP17L7P0C7H9 530 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ZDHHC11BP0C7U3 371 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ARID5AQ03989 594 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ADIGQ0VDE8 80 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 HTR4Q13639 388 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 SARM1Q6SZW1 724 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 CCDC186Q7Z3E2 898 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ARID3BQ8IVW6 561 aaPredicted RBP26.9■■□□□ 1.9
SMAD6-202ENST00000557916 CMTM8Q8IZV2 173 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 RSAD2Q8WXG1 361 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 DDX1Q92499 740 aaKnown RBP26.9■■□□□ 1.9
SMAD6-202ENST00000557916 FGF14Q92915 247 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 ST7Q9NRC1 585 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 IGSF9Q9P2J2 1179 aa26.9■■□□□ 1.9
SMAD6-202ENST00000557916 C2orf78A6NCI8 922 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 LRRC53A6NM62 1247 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 ZBED1O96006 694 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 LCP1P13796 627 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 AVPR1AP37288 418 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 SNX30Q5VWJ9 437 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 ZNF677Q86XU0 584 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 SIX6OS1Q8N1H7 587 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 STK32AQ8WU08 396 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 NXPE3Q969Y0 559 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 IQCDQ96DY2 449 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 CYP2S1Q96SQ9 504 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 ULBP1Q9BZM6 244 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 TRPV4Q9HBA0 871 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 TLR8Q9NR97 1041 aaKnown RBP26.89■■□□□ 1.89
SMAD6-202ENST00000557916 NOCTQ9UK39 431 aaKnown RBP26.89■■□□□ 1.89
SMAD6-202ENST00000557916 CEP83Q9Y592 693 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 NUMBLQ9Y6R0 609 aa26.89■■□□□ 1.89
SMAD6-202ENST00000557916 ITIH6Q6UXX5 1313 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 TRAV19A0A0A6YYK7 116 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 GABBR2O75899 941 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 CCDC172P0C7W6 258 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 FERP16591 822 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 PGFP49763 221 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 PM20D1Q6GTS8 502 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 TANGO2Q6ICL3 276 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 FMNL3Q8IVF7 1028 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 WDTC1Q8N5D0 677 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 SLC20A1Q8WUM9 679 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 KXD1Q9BQD3 176 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 TRIM5Q9C035 493 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 ZFP14Q9HCL3 533 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 CYTH4Q9UIA0 394 aa26.88■■□□□ 1.89
SMAD6-202ENST00000557916 PIK3R2O00459 728 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 AP5Z1O43299 807 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 MMEP08473 750 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 FCARP24071 287 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 WEE1P30291 646 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 RPL34P49207 117 aaKnown RBP26.87■■□□□ 1.89
SMAD6-202ENST00000557916 SLC22A12Q96S37 553 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 SLC4A5Q9BY07 1137 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 CNGB3Q9NQW8 809 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 OBSL1O75147 1896 aa26.87■■□□□ 1.89
SMAD6-202ENST00000557916 TTC28Q96AY4 2481 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 A0A1W2PQH9 124 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 A0A1W2PQJ5 194 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 ECI2O75521 394 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 CKMP06732 381 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 PFKLP17858 780 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 HDCP19113 662 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 VIPR2P41587 438 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 ACADSBP45954 432 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 CDR2Q01850 454 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 PDCLQ13371 301 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 HECTD3Q5T447 861 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 ARL14EPQ8N8R7 260 aaPredicted RBP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 C1orf131Q8NDD1 294 aaKnown RBP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 CPLX3Q8WVH0 158 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 ELSPBP1Q96BH3 223 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 NOX5Q96PH1 765 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 RPP25Q9BUL9 199 aaKnown RBP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 COL25A1Q9BXS0 654 aaPredicted RBP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 SMG9Q9H0W8 520 aaKnown RBP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 NMUR1Q9HB89 426 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 NAGPAQ9UK23 515 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.86■■□□□ 1.89
SMAD6-202ENST00000557916 DENND4CQ5VZ89 1909 aa26.86■■□□□ 1.89
SMAD6-202ENST00000557916 PRAMEF12O95522 483 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 OAS1P00973 400 aaKnown RBP26.85■■□□□ 1.89
SMAD6-202ENST00000557916 PSEN1P49768 467 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 SFMBT2Q5VUG0 894 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 SPECC1LQ69YQ0 1117 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 IRF2BP2Q7Z5L9 587 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 SCD5Q86SK9 330 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 VSTM4Q8IW00 320 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 SCML4Q8N228 414 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 TMEM35BQ8NCS4 154 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 ZNF397Q8NF99 534 aaPredicted RBP26.85■■□□□ 1.89
SMAD6-202ENST00000557916 NDRG1Q92597 394 aaKnown RBP26.85■■□□□ 1.89
SMAD6-202ENST00000557916 E2F7Q96AV8 911 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 CCSER2Q9H7U1 834 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms