RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 MARK2Q7KZI7 788 aaKnown RBP11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 MCUQ8NE86 351 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 PLEKHO2Q8TD55 490 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 HSD17B14Q9BPX1 270 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SAR1AQ9NR31 198 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 IL1RAPL1Q9NZN1 696 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 ARHGAP26Q9UNA1 814 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 MT-CO1P00395 513 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 EGFRP00533 1210 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SNRPAP09012 282 aaKnown RBP11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 GNAZP19086 355 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 TYK2P29597 1187 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 DSG3P32926 999 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SLC5A9Q2M3M2 681 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SHC3Q92529 594 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 PPP2R3CQ969Q6 453 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 POLR3FQ9H1D9 316 aaPredicted RBP11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 SEMA6AQ9H2E6 1030 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 ZNF212Q9UDV6 495 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
CCDC85C-207ENST00000557769 PRPSAP2O60256 369 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 HNRNPCL1O60812 293 aaKnown RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 WFS1O76024 890 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 VAV1P15498 845 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 POLR2BP30876 1174 aaKnown RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 RARRES1P49788 294 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 MORF4L2Q15014 288 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 HYIQ5T013 277 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 GPC2Q8N158 579 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 OR6Y1Q8NGX8 325 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 UBA3Q8TBC4 463 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 MARK4Q96L34 752 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 HEXIM2Q96MH2 286 aaKnown RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 EBF4Q9BQW3 602 aa11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 SUDS3Q9H7L9 328 aaPredicted RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 NOCTQ9UK39 431 aaKnown RBP11.33□□□□□ -0.59
CCDC85C-207ENST00000557769 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 TCRBV7S3A2A0A539 114 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 NFIBO00712 420 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 FDX1P10109 184 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 ALADP13716 330 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 AQP4P55087 323 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 GDF10P55107 478 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 BCAR1P56945 870 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 OASLQ15646 514 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 HPS6Q86YV9 775 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 UNC45BQ8IWX7 931 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 DNAAF3Q8N9W5 541 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 EXD1Q8NHP7 514 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 CCT7Q99832 543 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 ADPGKQ9BRR6 497 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 STX18Q9P2W9 335 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 GAKO14976 1311 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 INO80B-WBP1J3KQ70 363 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 OAS1P00973 400 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 RPL22P35268 128 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 TPD52P55327 224 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 NLRP11P59045 1033 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 CDC16Q13042 620 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 SEPT6Q14141 434 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 LBRQ14739 615 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 PDK3Q15120 406 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 TRMT5Q32P41 509 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 MSS51Q4VC12 460 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 EME1Q96AY2 570 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 SERAC1Q96JX3 654 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 SIKE1Q9BRV8 207 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 MRPL42Q9Y6G3 142 aaKnown RBP11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 LAMB1P07942 1786 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 NAV1Q8NEY1 1877 aa11.33□□□□□ -0.6
CCDC85C-207ENST00000557769 CIITAP33076 1130 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 Q4G0T1 1027 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 CIAPIN1Q6FI81 312 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 KBTBD2Q8IY47 623 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 SLC24A2Q9UI40 661 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 UGT1A9O60656 530 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 ATP6V1G1O75348 118 aa11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
CCDC85C-207ENST00000557769 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms