RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MYLK4Q86YV6 388 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 WDR49Q8IV35 697 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ARID3BQ8IVW6 561 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 BRSK2Q8IWQ3 736 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PPM1NQ8N819 430 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 SPATA18Q8TC71 538 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 TFAP2BQ92481 460 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 APBB2Q92870 758 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ACAP3Q96P50 834 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PLLPQ9Y342 182 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 TELO2Q9Y4R8 837 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PSME4Q14997 1843 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 CHADO15335 359 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ACTR3P61158 418 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PSMC1P62191 440 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 KDSRQ06136 332 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 IZUMO2Q6UXV1 221 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 CDHR3Q6ZTQ4 885 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PRPF39Q86UA1 669 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 CRLF3Q8IUI8 442 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ARHGAP18Q8N392 663 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 CFAP36Q96G28 342 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 ZNF180Q9UJW8 692 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 PLA2G4CQ9UP65 541 aa12.31□□□□□ -0.44
VIPAS39-211ENST00000557658 LYNP07948 512 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 CMASQ8NFW8 434 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 FAF2Q96CS3 445 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 PANX3Q96QZ0 392 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 THTPAQ9BU02 230 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 MECRQ9BV79 373 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 CALN1Q9BXU9 219 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 FRMD8Q9BZ67 464 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 RSAD1Q9HA92 442 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 TTLL3Q9Y4R7 772 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 ARL2P36404 184 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 GRM1Q13255 1194 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 TRPC3Q13507 836 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 CHI3L2Q15782 390 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 SUPT20HL1Q3ZLR7 823 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 HSF5Q4G112 596 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 RAB3IL1Q8TBN0 382 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 HSPH1Q92598 858 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
VIPAS39-211ENST00000557658 MED7O43513 233 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 FKBP6O75344 327 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 RNF8O76064 485 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 RGS20O76081 388 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 BAG2O95816 211 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CD19P15391 556 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CRABP2P29373 138 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 NRLP54845 237 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 AQP5P55064 265 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CBLBQ13191 982 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 DGKZQ13574 1117 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 NOMO1Q15155 1222 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 SCARA5Q6ZMJ2 495 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 EMC1Q8N766 993 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 SLC7A3Q8WY07 619 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 TTC1Q99614 292 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 C1orf21Q9H246 121 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 LHX5Q9H2C1 402 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 MKS1Q9NXB0 559 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 SLC7A8Q9UHI5 535 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 TRDMT1O14717 391 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 AVILO75366 819 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 ATG7O95352 703 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 EDN1P05305 212 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 MIPP30301 263 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CCNFP41002 786 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 MAP3K10Q02779 954 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms