RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 TOE1Q96GM8 510 aaKnown RBP11.11□□□□□ -0.63
TRAV33-201ENST00000557514 ACOX2Q99424 681 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 TTLL2Q9BWV7 592 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 TM6SF1Q9BZW5 370 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 SLC6A17Q9H1V8 727 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 ASB7Q9H672 318 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 IGSF5Q9NSI5 407 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 USP36Q9P275 1121 aaKnown RBP11.11□□□□□ -0.63
TRAV33-201ENST00000557514 CFAP97Q9P2B7 532 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 DEC1Q9P2X7 70 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 DNM3Q9UQ16 869 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 NOTCH2Q04721 2471 aa11.11□□□□□ -0.63
TRAV33-201ENST00000557514 B8ZZF3 427 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 WISP1O95388 367 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 ACAT1P24752 427 aaKnown RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 NCKAP1LP55160 1127 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 USP46P62068 366 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 RTP5Q14D33 572 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 TAF1BQ53T94 588 aaPredicted RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SPATA2LQ8IUW3 424 aaPredicted RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SCN4BQ8IWT1 228 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 OTUB2Q96DC9 234 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SPATA17Q96L03 361 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 CEP295NLQ96MC4 621 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 ZNF560Q96MR9 790 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 MSTO1Q9BUK6 570 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 MIR1-1HGQ9H1L0 117 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 DDX43Q9NXZ2 648 aaKnown RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 WSB2Q9NYS7 404 aaPredicted RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 TRPM5Q9NZQ8 1165 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 GMIPQ9P107 970 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 TBC1D14Q9P2M4 693 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 PCDHGA1Q9Y5H4 931 aa11.1□□□□□ -0.63
TRAV33-201ENST00000557514 MUC22E2RYF6 1773 aaPredicted RBP11.1□□□□□ -0.63
TRAV33-201ENST00000557514 HELZP42694 1942 aaKnown RBP11.09□□□□□ -0.63
TRAV33-201ENST00000557514 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 A0A1B0GVT2 93 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 E2F8A0AVK6 867 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 H0YCG3 227 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 TRIM24O15164 1050 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 PCDHGA12O60330 932 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 HNF1BP35680 557 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 PNPLA4P41247 253 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 CXADRP78310 365 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 SUZ12Q15022 739 aaKnown RBP11.09□□□□□ -0.63
TRAV33-201ENST00000557514 CCDC157Q569K6 752 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 BTBD8Q5XKL5 378 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 KIAA1324Q6UXG2 1013 aaKnown RBP11.09□□□□□ -0.63
TRAV33-201ENST00000557514 DENND5BQ6ZUT9 1274 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 FMNL3Q8IVF7 1028 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 NAT16Q8N8M0 369 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 ENGASEQ8NFI3 743 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
TRAV33-201ENST00000557514 GPR174Q9BXC1 333 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 NRSN2Q9GZP1 204 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 PDRG1Q9NUG6 133 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 RAD54BQ9Y620 910 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 DENND4CQ5VZ89 1909 aa11.09□□□□□ -0.63
TRAV33-201ENST00000557514 KNL1Q8NG31 2342 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 METTL12A8MUP2 240 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 HCRTO43612 131 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 REC8O95072 547 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 C6P13671 934 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 IL12RB1P42701 662 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 PPP3CCP48454 512 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 CCT8P50990 548 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 CLDN6P56747 220 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 MYL7Q01449 175 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 RHDQ02161 417 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 RAD51AP2Q09MP3 1159 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 ZNF174Q15697 407 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 KIF19Q2TAC6 998 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 DCAF12L1Q5VU92 463 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 GRAMD4Q6IC98 578 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 VSTM1Q6UX27 236 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 OSTM1Q86WC4 334 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 C4orf32Q8N8J7 132 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 ERLEC1Q96DZ1 483 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms