RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ATN1P54259 1190 aaPredicted RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 FAM133BQ5BKY9 247 aaKnown RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 RIOX2Q8IUF8 465 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 SLC22A9Q8IVM8 553 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 C1orf54Q8WWF1 131 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 ERGIC2Q96RQ1 377 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 APBA2Q99767 749 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 RPS6KB2Q9UBS0 482 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 MYBP10242 640 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 MSH3P20585 1137 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 SERPINB8P50452 374 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 MAGOHP61326 146 aaKnown RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 MAD2L1Q13257 205 aaPredicted RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 PAN2Q504Q3 1202 aaKnown RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 DEFB132Q7Z7B7 95 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 STK40Q8N2I9 435 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 STAMBPL1Q96FJ0 436 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 ATP6V1G3Q96LB4 118 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 OLFM3Q96PB7 478 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 ASCC2Q9H1I8 757 aaPredicted RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 LRRC40Q9H9A6 602 aa8.65□□□□□ -1.02
CHD8-213ENST00000557364 METTL5Q9NRN9 209 aaKnown RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 SAE1Q9UBE0 346 aaPredicted RBP8.65□□□□□ -1.02
CHD8-213ENST00000557364 SDR42E2A6NKP2 422 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 MAN1A2O60476 641 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 PCDH8O95206 1070 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 CD2BP2O95400 341 aaKnown RBP8.65□□□□□ -1.03
CHD8-213ENST00000557364 VIL1P09327 827 aaKnown RBP8.65□□□□□ -1.03
CHD8-213ENST00000557364 YY1P25490 414 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 TKTP29401 623 aaKnown RBP8.65□□□□□ -1.03
CHD8-213ENST00000557364 SLC39A8Q9C0K1 460 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 SNX12Q9UMY4 172 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 PP2D1A8MPX8 630 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 GOLGA8RI6L899 631 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 KPNA5O15131 536 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 WEE2P0C1S8 567 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 STX5Q13190 355 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 HORMAD1Q86X24 394 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 TMEM176AQ96HP8 235 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 MTO1Q9Y2Z2 717 aaKnown RBP8.65□□□□□ -1.03
CHD8-213ENST00000557364 NFASCO94856 1347 aa8.65□□□□□ -1.03
CHD8-213ENST00000557364 SLC12A8A0AV02 714 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 POLR2EP19388 210 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 PRKAA2P54646 552 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 GLMNQ92990 594 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 UBE2E3Q969T4 207 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 NMRK2Q9NPI5 230 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 KLHL28Q9NXS3 571 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 MST1RQ04912 1400 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 F8W810 466 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 MYBL2P10244 700 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 GTF2E2P29084 291 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 BCORL1Q5H9F3 1711 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CHMP1BQ7LBR1 199 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 DEFB128Q7Z7B8 93 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 SUSD6Q92537 303 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CDCA5Q96FF9 252 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 QRFPRQ96P65 431 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ELAC2Q9BQ52 826 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 APOL5Q9BWW9 433 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 FAM47DPA6NHR8 397 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CST8O60676 142 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 PAEPP09466 180 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ALDH5A1P51649 535 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 THOP1P52888 689 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 SYTL5Q8TDW5 730 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 VAT1Q99536 393 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 SYT15Q9BQS2 421 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RTFDC1Q9BY42 306 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 ARHGEF9O43307 516 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 TBX4P57082 545 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 VPS33AQ96AX1 596 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 C2orf49Q9BVC5 232 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 RAD21L1Q9H4I0 556 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 SPG21Q9NZD8 308 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ZSCAN5CA6NGD5 496 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 TMEM114B3SHH9 223 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 EIF2S1P05198 315 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 SOAT1P35610 550 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 EFEMP1Q12805 493 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ZNF211Q13398 564 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 PGM5Q15124 567 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 FAM46CQ5VWP2 391 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 MTSS1LQ765P7 747 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 DIS3LQ8TF46 1054 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 TMEM159Q96B96 161 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RIC1Q4ADV7 1423 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ACKR2O00590 384 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RAMP2O60895 175 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CYP11B1P15538 503 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RPL9P32969 192 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 CHKAP35790 457 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 NPTX2P47972 431 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms