RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 PTK2Q05397 1052 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 IFRD2Q12894 506 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-222ENST00000557356 RUNX3Q13761 415 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 LRRC32Q14392 662 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 MTF1Q14872 753 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 CCDC142Q17RM4 750 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 DGKKQ5KSL6 1271 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 FKBP15Q5T1M5 1219 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 LCLAT1Q6UWP7 414 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 NUDT18Q6ZVK8 323 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 RRAGAQ7L523 313 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 CCDC186Q7Z3E2 898 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 IRF2BP1Q8IU81 584 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 SCML4Q8N228 414 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 SYNPOQ8N3V7 929 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 RBBP8NLQ8NC74 664 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-222ENST00000557356 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 SCAMP5Q8TAC9 235 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 SH3RF2Q8TEC5 729 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 OSCP1Q8WVF1 389 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 KCTD13Q8WZ19 329 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 GOLGA1Q92805 767 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 HSFY1Q96LI6 401 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 TWNKQ96RR1 684 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 CYP2S1Q96SQ9 504 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 ARID3AQ99856 593 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 FAM83CQ9BQN1 747 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 SMOC2Q9H3U7 446 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 HEBP1Q9NRV9 189 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 OLA1Q9NTK5 396 aaKnown RBP8.28□□□□□ -1.08
PSEN1-222ENST00000557356 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
PSEN1-222ENST00000557356 CLIC5Q9NZA1 410 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 HMGXB4Q9UGU5 601 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 PIAS3Q9Y6X2 628 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 TSC2P49815 1807 aa8.28□□□□□ -1.08
PSEN1-222ENST00000557356 C2orf78A6NCI8 922 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 LRRC10BA6NIK2 292 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 HHLA1C9JL84 531 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 O00370 1275 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-222ENST00000557356 TLR5O60602 858 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 BEST1O76090 585 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 FBXO21O94952 628 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 PRAMEF12O95522 483 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 ZBED1O96006 694 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 KRT5P13647 590 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 PON1P27169 355 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 CACNA2D1P54289 1103 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 ORC1Q13415 861 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 UBXN2BQ14CS0 331 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 GOLGA7BQ2TAP0 167 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 KLHL40Q2TBA0 621 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 FBXO43Q4G163 708 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 PM20D1Q6GTS8 502 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 MAMSTRQ6ZN01 415 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 PIGZQ86VD9 579 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 FMNL3Q8IVF7 1028 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 SIX6OS1Q8N1H7 587 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 UBR7Q8N806 425 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 DTWD2Q8NBA8 298 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 ZMIZ2Q8NF64 920 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 CLDN23Q96B33 292 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 MED15Q96RN5 788 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 CRACR2AQ9BSW2 395 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 RNF38Q9H0F5 515 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 LTB4R2Q9NPC1 389 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 TMEM30AQ9NV96 361 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 TMEM51Q9NW97 253 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 LSM7Q9UK45 103 aaKnown RBP8.27□□□□□ -1.09
PSEN1-222ENST00000557356 TSPAN16Q9UKR8 245 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 STRIP2Q9ULQ0 834 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF510Q9Y2H8 683 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 SH3BP1Q9Y3L3 701 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 CEP83Q9Y592 693 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
PSEN1-222ENST00000557356 DOCK8Q8NF50 2099 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 BECN2A8MW95 431 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SPECC1L-ADORA2AF8WAN1 911 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 LEFTY2O00292 366 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ARNTLO00327 626 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 COCHO43405 550 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ATG13O75143 517 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 TADA3O75528 432 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ADH1CP00326 375 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 PDGFBP01127 241 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SLC9A1P19634 815 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 KRT9P35527 623 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 USP8P40818 1118 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 TKTL1P51854 596 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 TPM4P67936 248 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 TYRO3Q06418 890 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms