RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GLRA3O75311 464 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 PCSK2P16519 638 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ADORA2AP29274 412 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 NPTX2P47972 431 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 PGM5Q15124 567 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 RBM15Q96T37 977 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEK9-210ENST00000557026 TACO1Q9BSH4 297 aaKnown RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 NEU2Q9Y3R4 380 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 WDR91A4D1P6 747 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TM9SF1O15321 606 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 FGF10O15520 208 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 TADA3O75528 432 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 IPMKQ8NFU5 416 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 KLHL28Q9NXS3 571 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 GMNCA6NCL1 334 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TRIM16O95361 564 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 GUCA1CO95843 209 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 MYBP10242 640 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 MAP2K2P36507 400 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 CCR3P51677 355 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■■■□□ 15.5
NEK9-210ENST00000557026 PKP1Q13835 747 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 HABP4Q5JVS0 413 aaKnown RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 SUSD6Q92537 303 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 VPS33AQ96AX1 596 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 OLFM3Q96PB7 478 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TRAV19A0A0A6YYK7 116 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 ERI2A8K979 691 aaKnown RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 MTA2O94776 668 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 MYL4P12829 197 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 UQCRBP14927 111 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 LAG3P18627 525 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 SERPINB8P50452 374 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 TBX4P57082 545 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 LYPLAL1Q5VWZ2 237 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 FBXO16Q8IX29 292 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 GLMNQ92990 594 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 MKL1Q969V6 931 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 C18orf25Q96B23 403 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 TASP1Q9H6P5 420 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 KELP23276 732 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 CXCR2P25025 360 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 DACT2Q5SW24 774 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 C1orf146Q5VVC0 180 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 MTSS1LQ765P7 747 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 PLPPR4Q7Z2D5 763 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 PHACTR4Q8IZ21 702 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
NEK9-210ENST00000557026 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
NEK9-210ENST00000557026 CST8O60676 142 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 INSRRP14616 1297 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 DARSP14868 501 aaKnown RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 ZNF7P17097 686 aaPredicted RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 TMEM62Q0P6H9 643 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 NCAPHQ15003 741 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 CARNMT1Q8N4J0 409 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 TMEM161AQ9NX61 479 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 PYCARDQ9ULZ3 195 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 MAGEC1O60732 1142 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 MZF1P28698 734 aaPredicted RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 DNAJC7Q99615 494 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 FRMPD4Q14CM0 1322 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 DDNO94850 711 aaPredicted RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 SLC2A4P14672 509 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 YY1P25490 414 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 NPY2RP49146 381 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 CSTF3Q12996 717 aaKnown RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 HIC1Q14526 733 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 LVRNQ6Q4G3 990 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 C2orf49Q9BVC5 232 aaPredicted RBP12.37□□□□□ -0.43
NEK9-210ENST00000557026 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 F8W810 466 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 PGK2P07205 417 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 OR56A5P0C7T3 313 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 MSH3P20585 1137 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 GCNT1Q02742 428 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 TMEM117Q9H0C3 514 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 DERAQ9Y315 318 aa12.37□□□□□ -0.43
NEK9-210ENST00000557026 WNT10BO00744 389 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms