RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GPR27Q9NS67 375 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 HOMER2Q9NSB8 354 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 RNF146Q9NTX7 359 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 TAB2Q9NYJ8 693 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 RGL1Q9NZL6 768 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 SEL1LQ9UBV2 794 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 FAM184BQ9ULE4 1060 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 CAPN11Q9UMQ6 739 aa4.87□□□□□ -1.63
SRP54-212ENST00000556992 QSER1Q2KHR3 1735 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MYH7P12883 1935 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 ARHGEF35A5YM69 484 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 TRIM49BA6NDI0 452 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 GLTPD2A6NH11 291 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 CHMP2AO43633 222 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 SLC25A27O95847 323 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 CCDC175P0C221 793 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MYCLP12524 364 aaPredicted RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 CR2P20023 1033 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 CASP14P31944 242 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 EPHX2P34913 555 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 KRT9P35527 623 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 COPB2P35606 906 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 ADCY8P40145 1251 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 RGS19P49795 217 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 INHBEP58166 350 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PSMC5P62195 406 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 SNRPFP62306 86 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 MRPS9P82933 396 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 ZBED6P86452 979 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 CYP4A11Q02928 519 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MAP4K2Q12851 820 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 ALCAMQ13740 583 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PRKG1Q13976 671 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 VGLL4Q14135 290 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MYBPC2Q14324 1141 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 TMEM132BQ14DG7 1078 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PGM5Q15124 567 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 LRRC41Q15345 812 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 STXBP2Q15833 593 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MAN2A1Q16706 1144 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 BMT2Q1RMZ1 405 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 ZNF568Q3ZCX4 644 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 FIGNQ5HY92 759 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 RINT1Q6NUQ1 792 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 EPM2AIP1Q7L775 607 aaPredicted RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 ARMC9Q7Z3E5 817 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 REXO1L1PQ8IX06 675 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 ANKRD35Q8N283 1001 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 REPS2Q8NFH8 660 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PIGOQ8TEQ8 1089 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 SCFD1Q8WVM8 642 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 HPS3Q969F9 1004 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 CNOT6LQ96LI5 555 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 ERGIC2Q96RQ1 377 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MPHOSPH6Q99547 160 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 DNAJC7Q99615 494 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 REEP2Q9BRK0 252 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MOV10L1Q9BXT6 1211 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 C12orf65Q9H3J6 166 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 UNC45AQ9H3U1 944 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 MRPL44Q9H9J2 332 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 PARVGQ9HBI0 331 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 METTL14Q9HCE5 456 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 ANKEF1Q9NU02 776 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 TRMT1Q9NXH9 659 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 CYP39A1Q9NYL5 469 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 COL20A1Q9P218 1284 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 DSEQ9UL01 958 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 ODF2LQ9ULJ1 636 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 TRAF3IP3Q9Y228 551 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PPP2R2CQ9Y2T4 447 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 RIPK3Q9Y572 518 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 PCDHA10Q9Y5I2 948 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 FRMPD4Q14CM0 1322 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 DDX60LQ5H9U9 1706 aaKnown RBP4.86□□□□□ -1.63
SRP54-212ENST00000556992 A0A1B0GUL6 1792 aa4.86□□□□□ -1.63
SRP54-212ENST00000556992 DYNC1I1O14576 645 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 EIF3DO15371 548 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRP54-212ENST00000556992 MFAP3LO75121 409 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 GYPCP04921 128 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 TRIM21P19474 475 aaKnown RBP4.85□□□□□ -1.63
SRP54-212ENST00000556992 SCP2P22307 547 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 VAMP1P23763 118 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 ABCD1P33897 745 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 FXR1P51114 621 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRP54-212ENST00000556992 ZNF131P52739 623 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 NANOS3P60323 173 aaKnown RBP4.85□□□□□ -1.63
SRP54-212ENST00000556992 KRT83P78385 493 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 IRX3P78415 501 aaPredicted RBP4.85□□□□□ -1.63
SRP54-212ENST00000556992 CDK17Q00537 523 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 DUSP8Q13202 625 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 ITGB3BPQ13352 177 aaPredicted RBP4.85□□□□□ -1.63
SRP54-212ENST00000556992 PPIL2Q13356 520 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 TOP3AQ13472 1001 aaPredicted RBP4.85□□□□□ -1.63
SRP54-212ENST00000556992 TUBB2AQ13885 445 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 PLS1Q14651 629 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 SYCP1Q15431 976 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 NFIL3Q16649 462 aa4.85□□□□□ -1.63
SRP54-212ENST00000556992 CCDC40Q4G0X9 1142 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms