RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-245ENST00000556958 POLQO75417 2590 aa6.22□□□□□ -1.41
ATXN3-245ENST00000556958 EVPLQ92817 2033 aa6.21□□□□□ -1.41
ATXN3-245ENST00000556958 PLXNB3Q9ULL4 1909 aa6.21□□□□□ -1.41
ATXN3-245ENST00000556958 TRAV19A0A0A6YYK7 116 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 M0QZQ0 153 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 SH2B2O14492 632 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 ATP9BO43861 1147 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 SOAT2O75908 522 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 CKMP06732 381 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 NFICP08651 508 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 CSH1P0DML2 217 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 CSH2P0DML3 217 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 KCNE1P15382 129 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 TCF3P15923 654 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 OXTRP30559 389 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 HSPA4P34932 840 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 PDE6CP51160 858 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 CLDN6P56747 220 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 NFKB2Q00653 900 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 E2F1Q01094 437 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 BNC1Q01954 994 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 SOX4Q06945 474 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 RESTQ13127 1097 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 DMP1Q13316 513 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 EPHA7Q15375 998 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 KIF19Q2TAC6 998 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 XKR4Q5GH76 650 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 DCAF12L1Q5VU92 463 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 OVOS1Q6IE37 1185 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 ALKAL1Q6UXT8 129 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 DSTYKQ6XUX3 929 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 MICU3Q86XE3 530 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 MB21D2Q8IYB1 491 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 ADGRG2Q8IZP9 1017 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 DCBLD1Q8N8Z6 715 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 SPATA20Q8TB22 786 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 RIN3Q8TB24 985 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 SH3RF2Q8TEC5 729 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 C2orf15Q8WU43 125 aaKnown RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 TOE1Q96GM8 510 aaKnown RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 FAM20AQ96MK3 541 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 LXNQ9BS40 222 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 GPR174Q9BXC1 333 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 PCED1AQ9H1Q7 454 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 TRPC7Q9HCX4 862 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 WSB2Q9NYS7 404 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 ADAMTS1Q9UHI8 967 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 EIF2B4Q9UI10 523 aaKnown RBP6.21□□□□□ -1.42
ATXN3-245ENST00000556958 ANKRD6Q9Y2G4 727 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 PCDHB6Q9Y5E3 794 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 WDR81Q562E7 1941 aa6.21□□□□□ -1.42
ATXN3-245ENST00000556958 BAZ2BQ9UIF8 2168 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 CYP3A7-CYP3A51PA0A087WV96 503 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ANTXRLA6NF34 631 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 EML1O00423 815 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 PAPSS1O43252 624 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 LARGE1O95461 756 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ITGAVP06756 1048 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ITGB6P18564 788 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 TYMPP19971 482 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 PAX3P23760 479 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 CYP3A7P24462 503 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 NMT1P30419 496 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 SLC6A11P48066 632 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 LSSP48449 732 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ACADVLP49748 655 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ASIC1P78348 528 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ORC1Q13415 861 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 DHCR24Q15392 516 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 RTN1Q16799 776 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 PFKFB3Q16875 520 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ARL13BQ3SXY8 428 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 BTBD8Q5XKL5 378 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 CDCA2Q69YH5 1023 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 KIAA1324Q6UXG2 1013 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 TMEM150AQ86TG1 271 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 RAB11FIP4Q86YS3 637 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 TPH2Q8IWU9 490 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 CHPFQ8IZ52 775 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 FSIP1Q8NA03 581 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 NSUN7Q8NE18 718 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 SPPL2BQ8TCT7 592 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 RFFLQ8WZ73 363 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 SKA1Q96BD8 255 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 CYP2S1Q96SQ9 504 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 NUP58Q9BVL2 599 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 POLR3FQ9H1D9 316 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 RPF1Q9H9Y2 349 aaKnown RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 OSGEPQ9NPF4 335 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 ANKEF1Q9NU02 776 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms