RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.24
PSEN1-219ENST00000556951 GCNAQ96QF7 691 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 MED15Q96RN5 788 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 SLC39A2Q9NP94 309 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-219ENST00000556951 ODF2LQ9ULJ1 636 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 WNT6Q9Y6F9 365 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 MGAQ8IWI9 3026 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
PSEN1-219ENST00000556951 OBSL1O75147 1896 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 NBPF19A0A087WUL8 3843 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 FAM13AO94988 1023 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 ADCY5O95622 1261 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 PAX3P23760 479 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 P2RY2P41231 377 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 PTGER3P43115 390 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 STX17P56962 302 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 RAD51AP2Q09MP3 1159 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 STRN3Q13033 797 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 MTF1Q14872 753 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 SDHAF4Q5VUM1 108 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 CC2D1AQ6P1N0 951 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-219ENST00000556951 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 KIAA0895Q8NCT3 520 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 MDGA1Q8NFP4 955 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
PSEN1-219ENST00000556951 RLN3Q8WXF3 142 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 KCNN1Q92952 543 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 ZHX3Q9H4I2 956 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 FANCLQ9NW38 375 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 DUS2Q9NX74 493 aaKnown RBP13.57□□□□□ -0.24
PSEN1-219ENST00000556951 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 MAPK8IP1Q9UQF2 711 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF638Q14966 1978 aaKnown RBP13.57□□□□□ -0.24
PSEN1-219ENST00000556951 SCN1AP35498 2009 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 PTPRQQ9UMZ3 2332 aa13.57□□□□□ -0.24
PSEN1-219ENST00000556951 TNRC6BQ9UPQ9 1833 aaKnown RBP13.56□□□□□ -0.24
PSEN1-219ENST00000556951 CYB561D2O14569 222 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 TNFRSF10BO14763 440 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 AP5Z1O43299 807 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 ENGP17813 658 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF131P52739 623 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 ZXDBP98169 803 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 MESP2Q0VG99 397 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 USP4Q13107 963 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 TAF12Q16514 161 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 CRY1Q16526 586 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
PSEN1-219ENST00000556951 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 COLEC12Q5KU26 742 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 SLC39A4Q6P5W5 647 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 SLC23A3Q6PIS1 610 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 SFTPA1Q8IWL2 248 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 CCDC33Q8N5R6 958 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 MYCT1Q8N699 235 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
PSEN1-219ENST00000556951 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
PSEN1-219ENST00000556951 MMP17Q9ULZ9 603 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 SRPK3Q9UPE1 567 aa13.56□□□□□ -0.24
PSEN1-219ENST00000556951 NOTCH2Q04721 2471 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 A0A0B4J269 797 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 OGTO15294 1046 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 PIGRP01833 764 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 NFICP08651 508 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF18P17022 549 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 MAPK8P45983 427 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 ZNF75DP51815 510 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 LMAN2Q12907 356 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 PEAR1Q5VY43 1037 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 SYT12Q8IV01 421 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
PSEN1-219ENST00000556951 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
PSEN1-219ENST00000556951 PDLIM2Q96JY6 352 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms