RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MUTYHQ9UIF7 546 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 UBQLN1Q9UMX0 589 aaKnown RBP5.68□□□□□ -1.5
ATXN3-244ENST00000556898 GIT1Q9Y2X7 761 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 COQ4Q9Y3A0 265 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 NME7Q9Y5B8 376 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 ANK1P16157 1881 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 ITIH6Q6UXX5 1313 aa5.68□□□□□ -1.5
ATXN3-244ENST00000556898 COL4A6Q14031 1691 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ANO9A1A5B4 782 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 LRRC53A6NM62 1247 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 NT5C1B-RDH14C9J2C7 533 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PODXLO00592 558 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PIRO00625 290 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 FSCN2O14926 492 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PMM2O15305 246 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 P4HA2O15460 535 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 MBTPS2O43462 519 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 STX10O60499 249 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 N4BP1O75113 896 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 MFAP3LO75121 409 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ASS1P00966 412 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ITGB1P05556 798 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 RB1P06400 928 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 TPM3P06753 285 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 THP07101 528 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PLEKP08567 350 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 WEE2P0C1S8 567 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 SKILP12757 684 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 UCHL3P15374 230 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 CD58P19256 250 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ACO1P21399 889 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 EPHA1P21709 976 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 GTF2H1P32780 548 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 BRCC3P46736 316 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 NOP14P78316 857 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ENPEPQ07075 957 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 CCDC173Q0VFZ6 552 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 TRPC3Q13507 836 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ZNF699Q32M78 642 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 NOMO2Q5JPE7 1267 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 RNF43Q68DV7 783 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PPFIBP1Q86W92 1011 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 OSTM1Q86WC4 334 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 DTX1Q86Y01 620 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 CD302Q8IX05 232 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 HACE1Q8IYU2 909 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PPM1KQ8N3J5 372 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 FBXL6Q8N531 539 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 BEST2Q8NFU1 509 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 UBASH3BQ8TF42 649 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 BCL7CQ8WUZ0 217 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ATOH1Q92858 354 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 UTP4Q969X6 686 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 KLHDC7BQ96G42 594 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 SPACA7Q96KW9 195 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 TWNKQ96RR1 684 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 CHP1Q99653 195 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 MRPL45Q9BRJ2 306 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 KCNF1Q9H3M0 494 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 ELAC1Q9H777 363 aaKnown RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 SMYD3Q9H7B4 428 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 NRDE2Q9H7Z3 1164 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PLEKHA5Q9HAU0 1116 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 DZANK1Q9NVP4 752 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 APEX2Q9UBZ4 518 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 PRG3Q9Y2Y8 225 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 DERAQ9Y315 318 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 C2CD2Q9Y426 696 aa5.67□□□□□ -1.5
ATXN3-244ENST00000556898 TIMM13Q9Y5L4 95 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-244ENST00000556898 TET1Q8NFU7 2136 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 GTPBP10A4D1E9 387 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ANKRD33BA6NCL7 494 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 AKR1B15C9JRZ8 316 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 FOXN3O00409 490 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 INPPL1O15357 1258 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 DGKIO75912 1065 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 GFPT2O94808 682 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 EOMESO95936 686 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 PTMAP06454 111 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ACPPP15309 386 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 TRIM21P19474 475 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 CYP3A5P20815 502 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 LRPAP1P30533 357 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 KRT9P35527 623 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 USP8P40818 1118 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ASPAP45381 313 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 OR1G1P47890 313 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 SLC11A1P49279 550 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 AP3M2P53677 418 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 BCAR1P56945 870 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 JAM2P57087 298 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 RBP5P82980 135 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 ZXDAP98168 799 aa5.66□□□□□ -1.5
ATXN3-244ENST00000556898 POU5F1Q01860 360 aaKnown RBP5.66□□□□□ -1.5
ATXN3-244ENST00000556898 PLCB3Q01970 1234 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms