RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 NCANO14594 1321 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 FAM170AA1A519 330 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 PRAMEF12O95522 483 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 LCP1P13796 627 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 VIPR2P41587 438 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 GPD2P43304 727 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 BPIFB4P59827 614 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 PLCB2Q00722 1185 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 ARID5AQ03989 594 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 RAB41Q5JT25 222 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 SMYD5Q6GMV2 418 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 TANGO2Q6ICL3 276 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 MTSS1LQ765P7 747 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 MON1AQ86VX9 555 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 ARID3BQ8IVW6 561 aaPredicted RBP18.42■□□□□ 0.54
SHMT2-225ENST00000556798 PDZD8Q8NEN9 1154 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 EPS8L1Q8TE68 723 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 SLC20A1Q8WUM9 679 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 OVCA2Q8WZ82 227 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 BAP1Q92560 729 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 NDRG1Q92597 394 aaKnown RBP18.42■□□□□ 0.54
SHMT2-225ENST00000556798 KHSRPQ92945 711 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHMT2-225ENST00000556798 ULBP1Q9BZM6 244 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 SCML2Q9UQR0 700 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 TICRRQ7Z2Z1 1910 aa18.42■□□□□ 0.54
SHMT2-225ENST00000556798 GABBR2O75899 941 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 CKMP06732 381 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 DDX6P26196 483 aaKnown RBP eCLIP18.41■□□□□ 0.54
SHMT2-225ENST00000556798 KRT9P35527 623 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 CMTM8Q8IZV2 173 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 ARL14EPQ8N8R7 260 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-225ENST00000556798 KCTD13Q8WZ19 329 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 DDX1Q92499 740 aaKnown RBP18.41■□□□□ 0.54
SHMT2-225ENST00000556798 RSPRY1Q96DX4 576 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 CYP2S1Q96SQ9 504 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 PLA2G2FQ9BZM2 168 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 TTYH3Q9C0H2 523 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 NMUR1Q9HB89 426 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 ZFP14Q9HCL3 533 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 ST7Q9NRC1 585 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 CYTH4Q9UIA0 394 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 PCDHGC3Q9UN70 934 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 MUC3AQ02505 3323 aa18.41■□□□□ 0.54
SHMT2-225ENST00000556798 TRAV19A0A0A6YYK7 116 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 A0A1W2PQH9 124 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 LRRC53A6NM62 1247 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 CBFA2T2O43439 604 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 TPM3P06753 285 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 ZDHHC11BP0C7U3 371 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 AVPR1AP37288 418 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 PPP3CCP48454 512 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 MEA1Q16626 185 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 CCDC186Q7Z3E2 898 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 C1orf131Q8NDD1 294 aaKnown RBP18.4■□□□□ 0.54
SHMT2-225ENST00000556798 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 CCSER2Q9H7U1 834 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 TLR8Q9NR97 1041 aaKnown RBP18.4■□□□□ 0.54
SHMT2-225ENST00000556798 OSER1Q9NX31 292 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
SHMT2-225ENST00000556798 CCL26Q9Y258 94 aa18.4■□□□□ 0.54
SHMT2-225ENST00000556798 HEPACAM2A8MVW5 462 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 AP5Z1O43299 807 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 NARSO43776 548 aaKnown RBP18.39■□□□□ 0.53
SHMT2-225ENST00000556798 ZBED1O96006 694 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 OAS1P00973 400 aaKnown RBP18.39■□□□□ 0.53
SHMT2-225ENST00000556798 MMEP08473 750 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 HDCP19113 662 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 PDCLQ13371 301 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 GRM2Q14416 872 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 VITQ6UXI7 678 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 BHLHA9Q7RTU4 235 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 TTC16Q8NEE8 873 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 CLEC4CQ8WTT0 213 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 USP13Q92995 863 aaPredicted RBP18.39■□□□□ 0.53
SHMT2-225ENST00000556798 ELSPBP1Q96BH3 223 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 HSFY1Q96LI6 401 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 RNF38Q9H0F5 515 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 TRPV4Q9HBA0 871 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 ZMYM5Q9UJ78 669 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 SORCS3Q9UPU3 1222 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 TRIOO75962 3097 aa18.39■□□□□ 0.53
SHMT2-225ENST00000556798 COL4A2P08572 1712 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 COCHO43405 550 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 ECI2O75521 394 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 CHRNB2P17787 502 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 TDGQ13569 410 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 SNX30Q5VWJ9 437 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 E4F1Q66K89 784 aaPredicted RBP18.38■□□□□ 0.53
SHMT2-225ENST00000556798 SLC44A3Q8N4M1 653 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 CPLX3Q8WVH0 158 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 NXPE3Q969Y0 559 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 LRRC3BQ96PB8 259 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms