RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CALCAP01258 141 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ZDHHC11BP0C7U3 371 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 FAM200BP0CF97 657 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 VDRP11473 427 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ATP1A3P13637 1013 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 NPR3P17342 541 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ANXA13P27216 316 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ADORA2BP29275 332 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 VIPR2P41587 438 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 GCGRP47871 477 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ZNF165P49910 485 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 COPB1P53618 953 aaKnown RBP10.21□□□□□ -0.77
SRP54-210ENST00000556380 MAP3K7CLP57077 242 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 CYP4F8P98187 520 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 PKDCCQ504Y2 493 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 GPR158Q5T848 1215 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 MTSS1LQ765P7 747 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ENOSF1Q7L5Y1 443 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 TTC30AQ86WT1 665 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 UBALD2Q8IYN6 164 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 AOPEPQ8N6M6 819 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ANKRD52Q8NB46 1076 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ZSCAN18Q8TBC5 510 aaPredicted RBP10.21□□□□□ -0.77
SRP54-210ENST00000556380 SHC3Q92529 594 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ELSPBP1Q96BH3 223 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 NAA15Q9BXJ9 866 aaKnown RBP10.21□□□□□ -0.77
SRP54-210ENST00000556380 VPS16Q9H269 839 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 PNPLA8Q9NP80 782 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 COMMD8Q9NX08 183 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 ZMYM5Q9UJ78 669 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 DUSP12Q9UNI6 340 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 PCDHB4Q9Y5E5 795 aa10.21□□□□□ -0.77
SRP54-210ENST00000556380 NCANO14594 1321 aa10.21□□□□□ -0.78
SRP54-210ENST00000556380 LGALS16A8MUM7 142 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 NARSO43776 548 aaKnown RBP10.2□□□□□ -0.78
SRP54-210ENST00000556380 RTN3O95197 1032 aaPredicted RBP10.2□□□□□ -0.78
SRP54-210ENST00000556380 TRIM21P19474 475 aaKnown RBP10.2□□□□□ -0.78
SRP54-210ENST00000556380 DDX6P26196 483 aaKnown RBP eCLIP10.2□□□□□ -0.78
SRP54-210ENST00000556380 YWHAQP27348 245 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 PGFP49763 221 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 KIF11P52732 1056 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SLC5A3P53794 718 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 TAF10Q12962 218 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 CNGA2Q16280 664 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SGO2Q562F6 1265 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 KLHDC7AQ5VTJ3 777 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SNX30Q5VWJ9 437 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 TXNDC8Q6A555 127 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 LCLAT1Q6UWP7 414 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 GPRIN1Q7Z2K8 1008 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 ARID3BQ8IVW6 561 aaPredicted RBP10.2□□□□□ -0.78
SRP54-210ENST00000556380 CMTM8Q8IZV2 173 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 RBBP8NLQ8NC74 664 aaPredicted RBP10.2□□□□□ -0.78
SRP54-210ENST00000556380 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SLC22A12Q96S37 553 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 KXD1Q9BQD3 176 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 DNAI2Q9GZS0 605 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 PLCB1Q9NQ66 1216 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SLC2A4RGQ9NR83 387 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 EHD2Q9NZN4 543 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 SIK3Q9Y2K2 1263 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 USP3Q9Y6I4 520 aa10.2□□□□□ -0.78
SRP54-210ENST00000556380 GREB1Q4ZG55 1949 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 C2orf78A6NCI8 922 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 TULP2O00295 520 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 FOXN3O00409 490 aaPredicted RBP10.19□□□□□ -0.78
SRP54-210ENST00000556380 GPR37L1O60883 481 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 PRAMEF12O95522 483 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 SRFP11831 508 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 CD19P15391 556 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 PPP3CCP48454 512 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 KLK7P49862 253 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 MFAP3P55082 362 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 GPC5P78333 572 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 ARHGAP15Q53QZ3 475 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 PLA2G2CQ5R387 149 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 VITQ6UXI7 678 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 MFSD6LQ8IWD5 586 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 MAB21L3Q8N8X9 362 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 SLC35F5Q8WV83 523 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 OVCA2Q8WZ82 227 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 MRPS31Q92665 395 aaKnown RBP10.19□□□□□ -0.78
SRP54-210ENST00000556380 USP13Q92995 863 aaPredicted RBP10.19□□□□□ -0.78
SRP54-210ENST00000556380 E2F7Q96AV8 911 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 ASIC4Q96FT7 647 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 GCNAQ96QF7 691 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 CYP2S1Q96SQ9 504 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 CBX8Q9HC52 389 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 ZFP14Q9HCL3 533 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 ACP6Q9NPH0 428 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 OBP2AQ9NY56 170 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 TRPM5Q9NZQ8 1165 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 CHORDC1Q9UHD1 332 aaPredicted RBP10.19□□□□□ -0.78
SRP54-210ENST00000556380 DNAJC12Q9UKB3 198 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms