RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 DBF4BQ8NFT6 615 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 C1orf54Q8WWF1 131 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 MYLIPQ8WY64 445 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.94□□□□□ -0.823e-6■■■■■ 50.8
HNRNPC-223ENST00000556142 RSPH1Q8WYR4 309 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 CENPIQ92674 756 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 RBM41Q96IZ5 413 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 SUSD3Q96L08 255 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 SMOQ99835 787 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 TRIM51Q9BSJ1 452 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 HEMGNQ9BXL5 484 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 ADAM33Q9BZ11 813 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 KLHL11Q9NVR0 708 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 ASNSD1Q9NWL6 643 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 EFR3BQ9Y2G0 817 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 INPP5FQ9Y2H2 1132 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 NEU2Q9Y3R4 380 aa9.94□□□□□ -0.82
HNRNPC-223ENST00000556142 HHLA1C9JL84 531 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 F8W810 466 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 TMEM189-UBE2V1I3L0A0 370 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 I3L4J1 428 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 DAPK3O43293 454 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 GRAP2O75791 330 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 B3GAT3O94766 335 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 CXCL10P02778 98 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 KRT1P04264 644 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 KRT7P08729 469 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 ODC1P11926 461 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 KRT10P13645 584 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 FOSL2P15408 326 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 PDGFRAP16234 1089 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 NPR3P17342 541 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 TYMPP19971 482 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 KDELR1P24390 212 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 GJC1P36383 396 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 SSR1P43307 286 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 SNX16P57768 344 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 HADHQ16836 314 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 C15orf59Q2T9L4 293 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 NOMO2Q5JPE7 1267 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 RAB41Q5JT25 222 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.824e-6■■□□□ 12.7
HNRNPC-223ENST00000556142 BNIPLQ7Z465 357 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 MREGQ8N565 214 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 TSEN2Q8NCE0 465 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 MYCBPAPQ8TBZ2 947 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 FAM71BQ8TC56 605 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 PCED1BQ96HM7 432 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 DDX23Q9BUQ8 820 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 FAM114A2Q9NRY5 505 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 TMEM30AQ9NV96 361 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 GRHL1Q9NZI5 618 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 HPCAL4Q9UM19 191 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 USP18Q9UMW8 372 aa9.93□□□□□ -0.82
HNRNPC-223ENST00000556142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 AGPSO00116 658 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TNFRSF10AO00220 468 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CD48P09326 243 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 LCP1P13796 627 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TFE3P19532 575 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 PTPN9P43378 593 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CACNA2D1P54289 1103 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 FAAP100Q0VG06 881 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 PAN2Q504Q3 1202 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 DRICH1Q6PGQ1 229 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 GLB1LQ6UWU2 654 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 ZDHHC24Q6UX98 284 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 FAM35AQ86V20 835 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 LRRTM3Q86VH5 581 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 APBB2Q92870 758 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 VWCEQ96DN2 955 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CFAP57Q96MR6 1250 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 GDAP1L1Q96MZ0 367 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TOX2Q96NM4 488 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CASD1Q96PB1 797 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TMEM209Q96SK2 561 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 ZWILCHQ9H900 591 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 CSNK1G1Q9HCP0 422 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 ZDHHC18Q9NUE0 388 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TMLHEQ9NVH6 421 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 KANSL3Q9P2N6 904 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 PCSK1NQ9UHG2 260 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 DSEQ9UL01 958 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 TP73O15350 636 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 RNF8O76064 485 aa9.92□□□□□ -0.82
HNRNPC-223ENST00000556142 FAM200BP0CF97 657 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms