RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 SIX1Q15475 284 aaPredicted RBP8.24□□□□□ -1.09
LINC00641-202ENST00000555688 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 XKR4Q5GH76 650 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 LIN9Q5TKA1 542 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 CYP4F22Q6NT55 531 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 PPP1R2P3Q6NXS1 205 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 NOTUMQ6P988 496 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 IFT20Q8IY31 132 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 TMEM35BQ8NCS4 154 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 C1orf131Q8NDD1 294 aaKnown RBP8.24□□□□□ -1.09
LINC00641-202ENST00000555688 FEZF2Q8TBJ5 459 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 SEC14L1Q92503 715 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 GDAP1L1Q96MZ0 367 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 LHX5Q9H2C1 402 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 SLITRK6Q9H5Y7 841 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 VIPAS39Q9H9C1 493 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 AMACRQ9UHK6 382 aa8.24□□□□□ -1.09
LINC00641-202ENST00000555688 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 TMEM191CA6NGB0 347 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 H3BQF6 201 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 O00370 1275 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PPEF2O14830 753 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 KPNA6O60684 536 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 TRPA1O75762 1119 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PGK1P00558 417 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 C6orf222P0C671 652 aaPredicted RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 CPB1P15086 417 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ECHS1P30084 290 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ST13P50502 369 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 RWDD2BP57060 319 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 RPL7AP62424 266 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ATP11AP98196 1134 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PRKCZQ05513 592 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ZNF252P-AS1Q0IIN9 211 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 INCA1Q0VD86 236 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 KCTD19Q17RG1 926 aaPredicted RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 FAM153CQ494X1 144 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 DAB2IPQ5VWQ8 1189 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ADAT2Q7Z6V5 191 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 C7orf31Q8N865 590 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PRELID2Q8N945 189 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 CAVIN3Q969G5 261 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 TMEM176AQ96HP8 235 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 NAP1L3Q99457 506 aaPredicted RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 NXF3Q9H4D5 531 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 ZFYVE1Q9HBF4 777 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 MRPL47Q9HD33 250 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PARVAQ9NVD7 372 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 FAM153AQ9UHL3 310 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 HPCAL4Q9UM19 191 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 NFU1Q9UMS0 254 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 NME7Q9Y5B8 376 aa8.23□□□□□ -1.09
LINC00641-202ENST00000555688 PDCD11Q14690 1871 aaKnown RBP8.23□□□□□ -1.09
LINC00641-202ENST00000555688 FSCN2O14926 492 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TLR3O15455 904 aaKnown RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TTI1O43156 1089 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 ADAMTS4O75173 837 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SMNDC1O75940 238 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 RECQL4O94761 1208 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CALB1P05937 261 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 GNAT1P11488 350 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 ALAS2P22557 587 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 AKAP5P24588 427 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 EPHB4P54760 987 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TAS2R40P59535 323 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 OGDHQ02218 1023 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 PTPN11Q06124 597 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CACNB2Q08289 660 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CLUL1Q15846 466 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CNGA2Q16280 664 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CYP1B1Q16678 543 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 PTPN20Q4JDL3 420 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 PERM1Q5SV97 790 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 MFSD14CQ5VZR4 134 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 GDF6Q6KF10 455 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 EMBQ6PCB8 327 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 APBB1IPQ7Z5R6 666 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SLC13A5Q86YT5 568 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 EIF1ADQ8N9N8 165 aaKnown RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SMG8Q8ND04 991 aaKnown RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SMC1BQ8NDV3 1235 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 C3orf58Q8NDZ4 430 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TTC9Q92623 222 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 WNT8BQ93098 351 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 C18orf25Q96B23 403 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 PLD4Q96BZ4 506 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 HERPUD2Q9BSE4 406 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 MTG1Q9BT17 334 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 CELF4Q9BZC1 486 aaKnown RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 FAM124BQ9H5Z6 455 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TJP2Q9UDY2 1190 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 TUBGCP4Q9UGJ1 667 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 BARX2Q9UMQ3 279 aaPredicted RBP8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SCINQ9Y6U3 715 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 DNAH12Q6ZR08 3092 aa8.22□□□□□ -1.09
LINC00641-202ENST00000555688 SMIM28A0A1B0GU29 152 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms