RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MCF2P10911 925 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 DESP17661 470 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 TAF11Q15544 211 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 PLEKHG4Q58EX7 1191 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 ZNF449Q6P9G9 518 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 MCUQ8NE86 351 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 HSPH1Q92598 858 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 SKA1Q96BD8 255 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 MTBPQ96DY7 904 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 PTCD3Q96EY7 689 aaKnown RBP16.86■□□□□ 0.29
TUBB3-209ENST00000555609 RNF157Q96PX1 679 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 TBCBQ99426 244 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 GPR20Q99678 358 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 CALN1Q9BXU9 219 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 KANSL3Q9P2N6 904 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 SLC17A7Q9P2U7 560 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 PCSK1NQ9UHG2 260 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
TUBB3-209ENST00000555609 DPYSL4O14531 572 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 HBP1O60381 514 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 KRT19P08727 400 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 SNRPAP09012 282 aaKnown RBP16.85■□□□□ 0.29
TUBB3-209ENST00000555609 CDH6P55285 790 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 BLMHQ13867 455 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 DBN1Q16643 649 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 ANGEL2Q5VTE6 544 aaKnown RBP16.85■□□□□ 0.29
TUBB3-209ENST00000555609 ARHGAP24Q8N264 748 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 EMC1Q8N766 993 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 C1orf127Q8N9H9 656 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.85■□□□□ 0.29
TUBB3-209ENST00000555609 FAF2Q96CS3 445 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 CDT1Q9H211 546 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 HEY2Q9UBP5 337 aa16.85■□□□□ 0.29
TUBB3-209ENST00000555609 C2CD4BA6NLJ0 364 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 FZD9O00144 591 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 PRPSAP2O60256 369 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 PRKCHP24723 683 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 EPHB2P29323 1055 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 SNX16P57768 344 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 YWHAGP61981 247 aaKnown RBP eCLIP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 INCA1Q0VD86 236 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 FAAP100Q0VG06 881 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 KBTBD12Q3ZCT8 623 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 FAM102AQ5T9C2 384 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 ATG16L1Q676U5 607 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 NT5DC4Q86YG4 428 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 RFWD2Q8NHY2 731 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 ELOVL4Q9GZR5 314 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 IQCGQ9H095 443 aaKnown RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 KLC2Q9H0B6 622 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 SDCBP2Q9H190 292 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 SMARCAD1Q9H4L7 1026 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 USP29Q9HBJ7 922 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 STOML1Q9UBI4 398 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 TJP2Q9UDY2 1190 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 WDR91A4D1P6 747 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 H7C0C1 242 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 M0QYV0 167 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 NFKBIEO00221 500 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 COPEO14579 308 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 DLDP09622 509 aaKnown RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 NEFHP12036 1026 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 CCNFP41002 786 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 ATP5OP48047 213 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 SERPINB4P48594 390 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 ZBTB16Q05516 673 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 MBTD1Q05BQ5 628 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 TSNAXIP1Q2TAA8 658 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 CCDC62Q6P9F0 684 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 LCLAT1Q6UWP7 414 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 LRRC6Q86X45 466 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 IFNLR1Q8IU57 520 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 LMNTD2Q8IXW0 634 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 SERAC1Q96JX3 654 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 C7orf26Q96N11 449 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 DENND2DQ9H6A0 471 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 C10orf88Q9H8K7 445 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 KCNK13Q9HB14 408 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 KCNK4Q9NYG8 393 aa16.84■□□□□ 0.29
TUBB3-209ENST00000555609 NKX1-2Q9UD57 310 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 BARX2Q9UMQ3 279 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-209ENST00000555609 INO80B-WBP1J3KQ70 363 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 NOP56O00567 594 aaKnown RBP16.83■□□□□ 0.28
TUBB3-209ENST00000555609 SLC25A27O95847 323 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 SETSIPP0DME0 302 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 RAP1GAPP47736 663 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 KRT81Q14533 505 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 ZRSR2Q15696 482 aaKnown RBP16.83■□□□□ 0.28
TUBB3-209ENST00000555609 CYS1Q717R9 158 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 IGDCC3Q8IVU1 814 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 RXFP2Q8WXD0 754 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms