RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZFRQ96KR1 1074 aaKnown RBP14.45□□□□□ -0.1
SNX6-203ENST00000555416 LINC00597Q9H2U6 94 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 KIF9Q9HAQ2 790 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 NMUR1Q9HB89 426 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 CPQQ9Y646 472 aa14.45□□□□□ -0.1
SNX6-203ENST00000555416 CACNA1IQ9P0X4 2223 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SPECC1L-ADORA2AF8WAN1 911 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 LEFTY2O00292 366 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 FGFR1OPO95684 399 aaKnown RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 TBX18O95935 607 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SLC9A1P19634 815 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 TBXAS1P24557 533 aaPredicted RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 ERCC5P28715 1186 aaPredicted RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 PPP3CCP48454 512 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 KIF11P52732 1056 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SLC7A9P82251 487 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SNX30Q5VWJ9 437 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 TMEM270Q6UE05 265 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 MAML2Q8IZL2 1156 aaPredicted RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 TTC39CQ8N584 583 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 OVCA2Q8WZ82 227 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 CLDN23Q96B33 292 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 SAMSN1Q9NSI8 373 aaKnown RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 RBM12Q9NTZ6 932 aaKnown RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 EHD2Q9NZN4 543 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 AJAP1Q9UKB5 411 aaPredicted RBP14.44□□□□□ -0.1
SNX6-203ENST00000555416 SCML2Q9UQR0 700 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 MYO16Q9Y6X6 1858 aa14.44□□□□□ -0.1
SNX6-203ENST00000555416 A0A1W2PQH9 124 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 O00370 1275 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 GABBR2O75899 941 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 CD19P15391 556 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 TCF3P15923 654 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 BRD2P25440 801 aaKnown RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 ZNF132P52740 706 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 NUBP1P53384 320 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 PTPN5P54829 565 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 PDE4CQ08493 712 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 RUNX3Q13761 415 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 ANGPT1Q15389 498 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 EML3Q32P44 896 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 MIIPQ5JXC2 388 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 C11orf57Q6ZUT1 292 aaPredicted RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 PIGZQ86VD9 579 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 PDZD8Q8NEN9 1154 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 NDRG1Q92597 394 aaKnown RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 OSBPL6Q9BZF3 934 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 FAM124BQ9H5Z6 455 aaPredicted RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 FBRSL1Q9HCM7 1045 aaKnown RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 PNPLA8Q9NP80 782 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 COMMD8Q9NX08 183 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 DUS2Q9NX74 493 aaKnown RBP14.43□□□□□ -0.1
SNX6-203ENST00000555416 NUDT5Q9UKK9 219 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 TSPAN16Q9UKR8 245 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 PCDHB4Q9Y5E5 795 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 USP3Q9Y6I4 520 aa14.43□□□□□ -0.1
SNX6-203ENST00000555416 VPS13AQ96RL7 3174 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 MAN2B1O00754 1011 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 MDM4O15151 490 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 MBL2P11226 248 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 CHRNB1P11230 501 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 PFKLP17858 780 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 MTIF2P46199 727 aaKnown RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 MLLT6P55198 1093 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 YWHAEP62258 255 aaKnown RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 GCNT1Q02742 428 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 CETN1Q12798 172 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 GAS6Q14393 721 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 PON2Q15165 354 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 PKDCCQ504Y2 493 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 SGO2Q562F6 1265 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 RAB41Q5JT25 222 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 HECTD3Q5T447 861 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 DPY19L2P1Q6NXN4 242 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 CC2D1AQ6P1N0 951 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 TRIM65Q6PJ69 517 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 RBBP8NLQ8NC74 664 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 FAM122AQ96E09 287 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 PRRX2Q99811 253 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 FBXO44Q9H4M3 255 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 C8orf33Q9H7E9 229 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 SIX2Q9NPC8 291 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 UBE2TQ9NPD8 197 aaPredicted RBP14.42□□□□□ -0.1
SNX6-203ENST00000555416 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 CFAP97Q9P2B7 532 aa14.42□□□□□ -0.1
SNX6-203ENST00000555416 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 TLR5O60602 858 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 VDRP11473 427 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 TRIM21P19474 475 aaKnown RBP14.41□□□□□ -0.1
SNX6-203ENST00000555416 PON1P27169 355 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 HOXC13P31276 330 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms