RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ACAD10Q6JQN1 1059 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PDZD4Q76G19 769 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 MON1AQ86VX9 555 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PHF13Q86YI8 300 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 GPIHBP1Q8IV16 184 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 IRGQQ8WZA9 623 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 SLITRK1Q96PX8 696 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CHP1Q99653 195 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 ZMYM5Q9UJ78 669 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SYNE2-219ENST00000555323 MAGED2Q9UNF1 606 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-219ENST00000555323 ZNF840PA6NDX5 716 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 TADA3O75528 432 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 FBXO21O94952 628 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ZBED1O96006 694 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 MYL4P12829 197 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 PFKLP17858 780 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 GABRR2P28476 465 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 PSEN1P49768 467 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 DAOAP59103 153 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 PTP4A2Q12974 167 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 SMAD2Q15796 467 aaKnown RBP13.34□□□□□ -0.27
SYNE2-219ENST00000555323 CLUL1Q15846 466 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 SLC5A9Q2M3M2 681 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 BHLHA9Q7RTU4 235 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 SCUBE3Q8IX30 993 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 CPA5Q8WXQ8 436 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 FBXO32Q969P5 355 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 VCPIP1Q96JH7 1222 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 MIS12Q9H081 205 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ISCUQ9H1K1 167 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 POMKQ9H5K3 350 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 PRDM6Q9NQX0 595 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 ST7Q9NRC1 585 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.27
SYNE2-219ENST00000555323 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
SYNE2-219ENST00000555323 NENFQ9UMX5 172 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
SYNE2-219ENST00000555323 CLUHO75153 1309 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
SYNE2-219ENST00000555323 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 E5RJQ4 531 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 NRG2O14511 850 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SART1O43290 800 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 GLI1P08151 1106 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 USP17L7P0C7H9 530 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 LCP1P13796 627 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 FSHRP23945 695 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 DDX6P26196 483 aaKnown RBP eCLIP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 WEE1P30291 646 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SCNN1AP37088 669 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 EIF4A3P38919 411 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TUBP50607 506 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 GSCP56915 257 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 GSDMDP57764 484 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 AAK1Q2M2I8 961 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 POTEHQ6S545 545 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SCD5Q86SK9 330 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SIX6OS1Q8N1H7 587 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ITFG1Q8TB96 612 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SHKBP1Q8TBC3 707 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ATXN2LQ8WWM7 1075 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 PDLIM2Q96JY6 352 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ATXN3LQ9H3M9 355 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TLR8Q9NR97 1041 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 CLIC5Q9NZA1 410 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TRPM5Q9NZQ8 1165 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 THEGQ9P2T0 379 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 TJP2Q9UDY2 1190 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 FAM50BQ9Y247 325 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 ZFP37Q9Y6Q3 630 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.28
SYNE2-219ENST00000555323 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.28
SYNE2-219ENST00000555323 A0A087X0T9 212 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms