RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 VEGFAP15692 232 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 HNRNPMP52272 730 aaKnown RBP eCLIP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 KLHL17Q6TDP4 642 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 ANKRD18AQ8IVF6 992 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 PROKR1Q8TCW9 393 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 ZBTB45Q96K62 511 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 NUDT22Q9BRQ3 303 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 SORBS1Q9BX66 1292 aaKnown RBP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 TP63Q9H3D4 680 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 TRIM36Q9NQ86 728 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 KCTD5Q9NXV2 234 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 PCDHGB3Q9Y5G1 929 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 HS3ST4Q9Y661 456 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 COL15A1P39059 1388 aa6.3□□□□□ -1.4
CKS1BP1-201ENST00000555221 A1L4Q6 167 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ADM5C9JUS6 153 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 PSMD9O00233 223 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 FCHO1O14526 889 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 PCDH17O14917 1159 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 YY2O15391 372 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ZSCAN9O15535 394 aaPredicted RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 IRAK2O43187 625 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 USP1O94782 785 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ONECUT2O95948 504 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ARL4CP56559 192 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 TIRAPP58753 221 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 FOXE3Q13461 319 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 POSTNQ15063 836 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 TBCCQ15814 346 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ATPAF1Q5TC12 328 aaPredicted RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 SLC9A4Q6AI14 798 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 NRSN1Q8IZ57 195 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 FSTL5Q8N475 847 aaPredicted RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 STT3BQ8TCJ2 826 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 SOCS4Q8WXH5 440 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ASB10Q8WXI3 467 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 GLG1Q92896 1179 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 GCC1Q96CN9 775 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 RSPRY1Q96DX4 576 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ZNF503Q96F45 646 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 AIFM2Q9BRQ8 373 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 KLC4Q9NSK0 619 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 STEAP1Q9UHE8 339 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 SCAF8Q9UPN6 1271 aaKnown RBP6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 SH2B3Q9UQQ2 575 aa6.29□□□□□ -1.4
CKS1BP1-201ENST00000555221 ZAR1LA6NP61 321 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 C1QTNF3-AMACRE9PGA6 284 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 PEX1O43933 1283 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 NXPH3O95157 252 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 ANXA6P08133 673 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 PDHA1P08559 390 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 NTSR1P30989 418 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 SP2Q02086 613 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 PTPRRQ15256 657 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 LY6KQ17RY6 165 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 NBPF8Q3BBV2 869 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 MIIPQ5JXC2 388 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 SULT6B1Q6IMI4 303 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 LIN54Q6MZP7 749 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 CAND1Q86VP6 1230 aaKnown RBP6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 CCDC117Q8IWD4 279 aaPredicted RBP6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 FBXL20Q96IG2 436 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 SERHL2Q9H4I8 314 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 SLC2A4RGQ9NR83 387 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 EHD3Q9NZN3 535 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 RIMKLBQ9ULI2 386 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 GTF2A1LQ9UNN4 478 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 SLC27A6Q9Y2P4 619 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 GPR52Q9Y2T5 361 aa6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 REXO2Q9Y3B8 237 aaKnown RBP6.28□□□□□ -1.4
CKS1BP1-201ENST00000555221 ADGRA2Q96PE1 1338 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 PNMA6EA0A0J9YXQ4 647 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 J3KTA2 159 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 AGPSO00116 658 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 IPO5O00410 1097 aaKnown RBP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 ACTL6BO94805 426 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 RHOP08100 348 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 LIPAP38571 399 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 PTPAQ15257 358 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 TREML2Q5T2D2 321 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 JMJD6Q6NYC1 403 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 MAVSQ7Z434 540 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 MRGPREQ86SM8 312 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 LCORLQ8N3X6 602 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 SUN3Q8TAQ9 357 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 OTUD7AQ8TE49 926 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR60Q8WVS4 1066 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 RUBCNQ92622 972 aa6.27□□□□□ -1.41
CKS1BP1-201ENST00000555221 WDR24Q96S15 920 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms