RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
TMEM260-206ENST00000555046 THG1LQ9NWX6 298 aaKnown RBP11.19□□□□□ -0.62
TMEM260-206ENST00000555046 OBP2AQ9NY56 170 aa11.19□□□□□ -0.62
TMEM260-206ENST00000555046 IL37Q9NZH6 218 aa11.19□□□□□ -0.62
TMEM260-206ENST00000555046 CDH22Q9UJ99 828 aa11.19□□□□□ -0.62
TMEM260-206ENST00000555046 PDCD11Q14690 1871 aaKnown RBP11.19□□□□□ -0.62
TMEM260-206ENST00000555046 NCANO14594 1321 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 TRAV19A0A0A6YYK7 116 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 XPO1O14980 1071 aaKnown RBP11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ECI2O75521 394 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SP100P23497 879 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ACADSBP45954 432 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 GPR15P49685 360 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF132P52740 706 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SLC5A3P53794 718 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 UBASH3AP57075 661 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF445P59923 1031 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 TAF10Q12962 218 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 DRAP1Q14919 205 aaPredicted RBP11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SLC5A9Q2M3M2 681 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 CLEC20AQ6ZU45 233 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SHKBP1Q8TBC3 707 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF606Q8WXB4 792 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ING5Q8WYH8 240 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 KAT5Q92993 513 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 FBXO32Q969P5 355 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 ELSPBP1Q96BH3 223 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 IQCDQ96DY2 449 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 TCEAL4Q96EI5 215 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 HSFY1Q96LI6 401 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SMOQ99835 787 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 TLR8Q9NR97 1041 aaKnown RBP11.18□□□□□ -0.62
TMEM260-206ENST00000555046 TSPAN16Q9UKR8 245 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SORCS3Q9UPU3 1222 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 SCML2Q9UQR0 700 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 CEP83Q9Y592 693 aa11.18□□□□□ -0.62
TMEM260-206ENST00000555046 VWA8A3KMH1 1905 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ANK1P16157 1881 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 A0A1W2PQC6 194 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 FAM92AA1XBS5 289 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF840PA6NDX5 716 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 O00370 1275 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 FOXN3O00409 490 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 TNFRSF10BO14763 440 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CBFA2T2O43439 604 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ABL1P00519 1130 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 USP17L7P0C7H9 530 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 RALAP11233 206 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ATP1A3P13637 1013 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CEBPBP17676 345 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 HDCP19113 662 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 GNA15P30679 374 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CCR2P41597 374 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 STAT1P42224 750 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 TUBP50607 506 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 KIF11P52732 1056 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ZXDAP98168 799 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 PFKPQ01813 784 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 SYCP1Q15431 976 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CCDC142Q17RM4 750 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 SNX30Q5VWJ9 437 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 FAM71AQ8IYT1 594 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CMTM8Q8IZV2 173 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 SLC44A3Q8N4M1 653 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CELF5Q8N6W0 485 aaKnown RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 KIAA1958Q8N8K9 716 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 KCTD13Q8WZ19 329 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ASIC4Q96FT7 647 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ASB16Q96NS5 453 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 EDEM3Q9BZQ6 932 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 MIS12Q9H081 205 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 PDCL3Q9H2J4 239 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 KIF9Q9HAQ2 790 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 ZNF334Q9HCZ1 680 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 SIX2Q9NPC8 291 aa11.17□□□□□ -0.62
TMEM260-206ENST00000555046 FAM207AQ9NSI2 230 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 CHORDC1Q9UHD1 332 aaPredicted RBP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMEM260-206ENST00000555046 A0A1B0GTH6 734 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 M0QYV0 167 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 CYP26A1O43174 497 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 SART1O43290 800 aaKnown RBP11.16□□□□□ -0.62
TMEM260-206ENST00000555046 THAP12O43422 761 aa11.16□□□□□ -0.62
TMEM260-206ENST00000555046 MOSPD3O75425 235 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms