RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ZMPSTE24O75844 475 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 KCNA4P22459 653 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 SDC4P31431 198 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 SERPINB6P35237 376 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 RPL10AP62906 217 aaKnown RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 ZRSR2Q15696 482 aaKnown RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 JADE1Q6IE81 842 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 USP6NLQ92738 828 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 HPDLQ96IR7 371 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 GMLQ99445 158 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 APOL2Q9BQE5 337 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 USP12O75317 370 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 ZWINTO95229 277 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 GCAP28676 217 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 SERPINB4P48594 390 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 AP1B1Q10567 949 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 PEX6Q13608 980 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 RASA2Q15283 850 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 KDELC2Q7Z4H8 507 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 FAM172AQ8WUF8 416 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 MMP19Q99542 508 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 PRM3Q9NNZ6 103 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 STARD13Q9Y3M8 1113 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 CSADQ9Y600 493 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 LACTBL1A8MY62 500 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 NVLO15381 856 aaKnown RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 HCRTO43612 131 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 LYPLA1O75608 230 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 USP1O94782 785 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 OSBPP22059 807 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 GRIA1P42261 906 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 NDST1P52848 882 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 PCGF5Q86SE9 256 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 MAP7D3Q8IWC1 876 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 RIBC1Q8N443 379 aaPredicted RBP12.35□□□□□ -0.43
XRCC3-208ENST00000554811 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 STK32AQ8WU08 396 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 LGALS13Q9UHV8 139 aa12.35□□□□□ -0.43
XRCC3-208ENST00000554811 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 NEMP1O14524 444 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 STAG3L1P0CL83 205 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 GM2AP17900 193 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 CALB2P22676 271 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 NME3Q13232 169 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 ANKLE1Q8NAG6 615 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 KLC2Q9H0B6 622 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 ATP8B3O60423 1300 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 CXorf49A8MYA2 514 aaPredicted RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 GOLGA8TH3BQL2 631 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 CCDC22O60826 627 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF286BP0CG31 522 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 RABGGTBP53611 331 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 MCL1Q07820 350 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 LGSNQ5TDP6 509 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 PDGFCQ9NRA1 345 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 SPATA31C2B4DYI2 1134 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 MAFGO15525 162 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 PDE5AO76074 875 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 GPD1P21695 349 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 PTPN4P29074 926 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 RFC5P40937 340 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 KCTD2Q14681 263 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 CRYMQ14894 314 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 SNX30Q5VWJ9 437 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 NXNQ6DKJ4 435 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 CRLF3Q8IUI8 442 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 C10orf82Q8WW14 230 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 L3MBTL3Q96JM7 780 aaPredicted RBP12.34□□□□□ -0.43
XRCC3-208ENST00000554811 IFT122Q9HBG6 1241 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 DONSONQ9NYP3 566 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
XRCC3-208ENST00000554811 APOL1O14791 398 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 CFLARO15519 480 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 TBC1D12O60347 775 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 OPHN1O60890 802 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 OAS1P00973 400 aaKnown RBP12.33□□□□□ -0.44
XRCC3-208ENST00000554811 DNAAF3Q8N9W5 541 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 RDM1Q8NG50 284 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 TRPM4Q8TD43 1214 aa12.33□□□□□ -0.44
XRCC3-208ENST00000554811 SLC26A7Q8TE54 656 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms