RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 JMJD4Q9H9V9 463 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 KCNH7Q9NS40 1196 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 TCP11L1Q9NUJ3 509 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 GPRC5BQ9NZH0 403 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 ASB1Q9Y576 335 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 COL4A3Q01955 1670 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 WDR19Q8NEZ3 1342 aa3.67□□□□□ -1.82
SLIRP-202ENST00000553981 TTC3P53804 2025 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 BAZ2BQ9UIF8 2168 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MYH6P13533 1939 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 LOC730098B7Z3J9 87 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 C5orf67F2Z3F1 127 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ENPP3O14638 875 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MGEA5O60502 916 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 RANBP6O60518 1105 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ATP9AO75110 1047 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 GH1P01241 217 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ITGB1P05556 798 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SMIM10L2AP0DMW4 78 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SMIM10L2BP0DMW5 78 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 TOP1P11387 765 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ACTN1P12814 892 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 UBA1P22314 1058 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 APEX1P27695 318 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SDHAP31040 664 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 HOXA13P31271 388 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SCNN1GP51170 649 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 HSD17B4P51659 736 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ADCY7P51828 1080 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 RRP1P56182 461 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ATP2C1P98194 919 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 GHRHRQ02643 423 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 COL10A1Q03692 680 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SSRP1Q08945 709 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 BFSP2Q13515 415 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 KCNC3Q14003 757 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 PGM5Q15124 567 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ALX1Q15699 326 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 CDC37Q16543 378 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 RRP12Q5JTH9 1297 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 CELF3Q5SZQ8 465 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MARCH8Q5T0T0 291 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ZSCAN25Q6NSZ9 544 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 Q6ZRM9 215 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 CYB5R4Q7L1T6 521 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ADHFE1Q8IWW8 467 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SPPL3Q8TCT6 385 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 CALML6Q8TD86 181 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SCFD2Q8WU76 684 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 DLG3Q92796 817 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 IPO9Q96P70 1041 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 PCYT2Q99447 389 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 PDCD2LQ9BRP1 358 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 DHRS4Q9BTZ2 278 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SEZ6LQ9BYH1 1024 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 TMX1Q9H3N1 280 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 VAT1LQ9HCJ6 419 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 PXMP2Q9NR77 195 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 SETD4Q9NVD3 440 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 ISY1Q9ULR0 285 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 BARX2Q9UMQ3 279 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 DDX19BQ9UMR2 479 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 COQ6Q9Y2Z9 468 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 VWA7Q9Y334 891 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 INSL6Q9Y581 213 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 B3GALT1Q9Y5Z6 326 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MRPL42Q9Y6G3 142 aaKnown RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MUC6Q6W4X9 2439 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 FNDC1Q4ZHG4 1894 aaPredicted RBP3.66□□□□□ -1.82
SLIRP-202ENST00000553981 MYO10Q9HD67 2058 aa3.66□□□□□ -1.82
SLIRP-202ENST00000553981 NCOR1O75376 2440 aa3.65□□□□□ -1.82
SLIRP-202ENST00000553981 LOC102724159A0A0B4J2E5 919 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 GSTTP1A0A1W2PQM5 241 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM221A6NGB7 291 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 RSPH10B2B2RC85 870 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 B4E1Z4 1266 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 KIF28PB7ZC32 967 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 M0R296 226 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 PER2O15055 1255 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 EYA4O95677 639 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 GGPS1O95749 300 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 LGALS2P05162 132 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 FAM153BP0C7A2 387 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 RSPH10BP0C881 870 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 MYCLP12524 364 aaPredicted RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 GNAT2P19087 354 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 CASTP20810 708 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 BMPR1AP36894 532 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 THPOP40225 353 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 ADAM8P78325 824 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 ALDH6A1Q02252 535 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 LPIN1Q14693 890 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 PWP2Q15269 919 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 CATSPEREQ5SY80 951 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 KLHDC10Q6PID8 442 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 STOX1Q6ZVD7 989 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 OVCH1Q7RTY7 1134 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 BMP8AQ7Z5Y6 402 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 AMOTL1Q8IY63 956 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 ENAHQ8N8S7 591 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms