RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 ALOX15BO15296 676 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 HCRTO43612 131 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 USP1O94782 785 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 ERBB2P04626 1255 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 KRT19P08727 400 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 BDNFP23560 247 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 PSMA2P25787 234 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 FKBP1AP62942 108 aaKnown RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 IGBP1P78318 339 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 OR52E8Q6IFG1 317 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 TREML1Q86YW5 311 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 USP6NLQ92738 828 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 NMUR2Q9GZQ4 415 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 SMYD2Q9NRG4 433 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 ETNK2Q9NVF9 386 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 ZNF214Q9UL59 606 aaPredicted RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 PGGT1BP53609 377 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 ATXN1P54253 815 aaKnown RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 FAM219BQ5XKK7 198 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 DEPTORQ8TB45 409 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 SLC13A1Q9BZW2 595 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 ARHGEF4Q9NR80 690 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 TUBGCP4Q9UGJ1 667 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 XPO7Q9UIA9 1087 aaKnown RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 A0A0B4J269 797 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 LSM1O15116 133 aaKnown RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 DGAT1O75907 488 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 GARTP22102 1010 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 TGFB2P61812 414 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 CLDN10P78369 228 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 CRADDP78560 199 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 RCN1Q15293 331 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 MCF2L2Q86YR7 1114 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 SLC35B2Q8TB61 432 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 NMRK1Q9NWW6 199 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 PSMC3IPQ9P2W1 217 aaPredicted RBP12.63□□□□□ -0.39
SPTB-206ENST00000553938 MFHAS1Q9Y4C4 1052 aa12.63□□□□□ -0.39
SPTB-206ENST00000553938 LCTP09848 1927 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 TCRBV9S1A1TA0A576 114 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTB-206ENST00000553938 FAM189A1O60320 539 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 IQCF3P0C7M6 154 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 CALB2P22676 271 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 NEK3P51956 506 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 MPP5Q8N3R9 675 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 NAT8LQ8N9F0 302 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 STK32AQ8WU08 396 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 IWS1Q96ST2 819 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 CCDC77Q9BR77 488 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 TMEM120AQ9BXJ8 343 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 VCXQ9H320 206 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 TJP3O95049 919 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 ZNF132P52740 706 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 EML3Q32P44 896 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 TRMT10BQ6PF06 316 aaKnown RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 MINDY3Q9H8M7 445 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 HTTP42858 3142 aa12.62□□□□□ -0.39
SPTB-206ENST00000553938 ZNF638Q14966 1978 aaKnown RBP12.62□□□□□ -0.39
SPTB-206ENST00000553938 NDUFB5O43674 189 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 TBX10O75333 385 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 E2F6O75461 281 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 DPEP1P16444 411 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 ATP6V1C1P21283 382 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 PHKA2P46019 1235 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
SPTB-206ENST00000553938 LY6KQ17RY6 165 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 EFHC2Q5JST6 749 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 NANOGNBQ7Z5D8 188 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 BANPQ8N9N5 519 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 GBP5Q96PP8 586 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 IP6K2Q9UHH9 426 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 TMEM98Q9Y2Y6 226 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 MAGEB2O15479 319 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 MYL2P10916 166 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 ASPAP45381 313 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 ARL4CP56559 192 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 YWHAGP61981 247 aaKnown RBP eCLIP12.61□□□□□ -0.394e-6■■■■□ 20.6
SPTB-206ENST00000553938 TMED1Q13445 227 aa12.61□□□□□ -0.39
SPTB-206ENST00000553938 OLIG2Q13516 323 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms