RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LARSQ9P2J5 1176 aaKnown RBP14.78□□□□□ -0.04
PRPF39-204ENST00000553605 TBC1D14Q9P2M4 693 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 BTBD3Q9Y2F9 522 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 HECTD1Q9ULT8 2610 aa14.78□□□□□ -0.04
PRPF39-204ENST00000553605 ZNF840PA6NDX5 716 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 TLX3O43711 291 aaPredicted RBP14.77□□□□□ -0.05
PRPF39-204ENST00000553605 PIGRP01833 764 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 CD6P30203 668 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 BNC1Q01954 994 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 SEMG2Q02383 582 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 KCNC4Q03721 635 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 PTPRNQ16849 979 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 CCDC142Q17RM4 750 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 TTC38Q5R3I4 469 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 EGFLAMQ63HQ2 1017 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 PCSK4Q6UW60 755 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 DHRS13Q6UX07 377 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 NECAB1Q8N987 351 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 TERB1Q8NA31 727 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 KCNN1Q92952 543 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 SPATA17Q96L03 361 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 MRGPRX1Q96LB2 322 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 ZNF560Q96MR9 790 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 ACOX2Q99424 681 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 L1RE1Q9UN81 338 aa14.77□□□□□ -0.05
PRPF39-204ENST00000553605 PP2D1A8MPX8 630 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 BCAT2O15382 392 aaPredicted RBP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 HUS1O60921 280 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 OLFM2O95897 454 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 ABL1P00519 1130 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 NCAM1P13591 858 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 PNPLA4P41247 253 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 MAGEA11P43364 429 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 PPP3CCP48454 512 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 USP46P62068 366 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 KIAA1324Q6UXG2 1013 aaKnown RBP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 DENND5BQ6ZUT9 1274 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 TMEM86AQ8N2M4 240 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 SYT2Q8N9I0 419 aaPredicted RBP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 CADM4Q8NFZ8 388 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 BAP1Q92560 729 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 TOE1Q96GM8 510 aaKnown RBP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 GPR174Q9BXC1 333 aa14.76□□□□□ -0.05
PRPF39-204ENST00000553605 WSB2Q9NYS7 404 aaPredicted RBP14.76□□□□□ -0.05
PRPF39-204ENST00000553605 E2F8A0AVK6 867 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 TRIM24O15164 1050 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 HOXC11O43248 304 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-204ENST00000553605 EPB41L2O43491 1005 aaKnown RBP14.75□□□□□ -0.05
PRPF39-204ENST00000553605 GRIK1P39086 918 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 MYO1EQ12965 1108 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 ANO4Q32M45 955 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 C6orf118Q5T5N4 469 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 DCAF12L1Q5VU92 463 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 SLC39A4Q6P5W5 647 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 NSUN7Q8NE18 718 aaKnown RBP14.75□□□□□ -0.05
PRPF39-204ENST00000553605 ENGASEQ8NFI3 743 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 OTUB2Q96DC9 234 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 CEP295NLQ96MC4 621 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 GABRG3Q99928 467 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 EHD2Q9NZN4 543 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 MAGEC2Q9UBF1 373 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-204ENST00000553605 PCDHB6Q9Y5E3 794 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 RAD54BQ9Y620 910 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 AK5Q9Y6K8 562 aa14.75□□□□□ -0.05
PRPF39-204ENST00000553605 MUC22E2RYF6 1773 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-204ENST00000553605 MYH11P35749 1972 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 PTPRQQ9UMZ3 2332 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 ATMQ13315 3056 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 A0A1B0GVT2 93 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 HCRTO43612 131 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 JAK2O60674 1132 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 OAS1P00973 400 aaKnown RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 MBL2P11226 248 aaPredicted RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 JUPP14923 745 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 SCP2P22307 547 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 PCSK1P29120 753 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 GRK6P43250 576 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 LHX1P48742 406 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 ZRSR1Q15695 479 aaKnown RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 TAF1BQ53T94 588 aaPredicted RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 FAM171BQ6P995 826 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 VSTM1Q6UX27 236 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 C4orf50Q6ZRC1 276 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 OSTM1Q86WC4 334 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 HNRNPABQ99729 332 aaKnown RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 MMTAG2Q9BU76 263 aaKnown RBP14.74□□□□□ -0.05
PRPF39-204ENST00000553605 TTLL2Q9BWV7 592 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 DNMT3LQ9UJW3 386 aa14.74□□□□□ -0.05
PRPF39-204ENST00000553605 METTL12A8MUP2 240 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 PYCARD-AS1I3L0S3 204 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 ERVH48-1M5A8F1 160 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 GABRDO14764 452 aa14.73□□□□□ -0.05
PRPF39-204ENST00000553605 ATP2C2O75185 946 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms