RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TTC26A0AVF1 554 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 BCLAF3A2AJT9 711 aaKnown RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 A6NHS1 94 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 CCDC169A6NNP5 214 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 FAM189A1O60320 539 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TOM1L1O75674 476 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 FGF19O95750 216 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TOP3BO95985 862 aaKnown RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 EGFP01133 1207 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TYMPP19971 482 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 SPINK2P20155 84 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 CCT6AP40227 531 aaKnown RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 ALDH1A3P47895 512 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 GUCY2FP51841 1108 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 RAC1P63000 192 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 SPAG1Q07617 926 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 MCL1Q07820 350 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 ACAP1Q15027 740 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 NAIF1Q69YI7 327 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TRIM68Q6AZZ1 485 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 ZNF438Q7Z4V0 828 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TMEM150AQ86TG1 271 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 CAMKK1Q8N5S9 505 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 C4orf32Q8N8J7 132 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 OR10T2Q8NGX3 314 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 HHIPQ96QV1 700 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 SLC46A2Q9BY10 475 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TASP1Q9H6P5 420 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 FBRSL1Q9HCM7 1045 aaKnown RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 KMT5AQ9NQR1 393 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 DDX19AQ9NUU7 478 aaKnown RBP7.89□□□□□ -1.15
ATXN3-219ENST00000553488 ANKFY1Q9P2R3 1169 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 SLC8A2Q9UPR5 921 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 CCL26Q9Y258 94 aa7.89□□□□□ -1.15
ATXN3-219ENST00000553488 TMEM8BA6NDV4 472 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 SRRM3A6NNA2 597 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 C4orf47A7E2U8 309 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 C9orf172C9J069 976 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 E9PMD0 336 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 DCLK1O15075 740 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 SLC16A4O15374 487 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 ATG13O75143 517 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 CYP3A5P20815 502 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 MARCKSP29966 332 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 CDC25CP30307 473 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 TNFSF9P41273 254 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 GATA4P43694 442 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 SERPINB4P48594 390 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 ATP11AP98196 1134 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 GRSF1Q12849 480 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 RUNX3Q13761 415 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 KARSQ15046 597 aaKnown RBP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 ZNF174Q15697 407 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 ARHGAP15Q53QZ3 475 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 PMS2CLQ68D20 193 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 C1orf186Q6ZWK4 172 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 KCNK18Q7Z418 384 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 WFDC8Q8IUA0 241 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 CMTM8Q8IZV2 173 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 C1orf127Q8N9H9 656 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 TMEM161BQ8NDZ6 487 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 USP13Q92995 863 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 DRC1Q96MC2 740 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 TCHPQ9BT92 498 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 EBF3Q9H4W6 596 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 C17orf75Q9HAS0 396 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 GKN1Q9NS71 199 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 EBF1Q9UH73 591 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 TBX20Q9UMR3 447 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 UBQLN1Q9UMX0 589 aaKnown RBP7.88□□□□□ -1.15
ATXN3-219ENST00000553488 TRIM33Q9UPN9 1127 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 PLXNB3Q9ULL4 1909 aa7.88□□□□□ -1.15
ATXN3-219ENST00000553488 CDX4O14627 284 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 TADA3O75528 432 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 CAVIN2O95810 425 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 CYP11A1P05108 521 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ADRB2P07550 413 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 CLTAP09496 248 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ARSAP15289 507 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 HMGA1P17096 107 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 CSRP1P21291 193 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 DRD1P21728 446 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 GUCY2CP25092 1073 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 U2AF2P26368 475 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 NMT1P30419 496 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 LILRA4P59901 499 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 GUCY1B3Q02153 619 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 CREB5Q02930 508 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ELF2Q15723 593 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ENOX2Q16206 610 aaKnown RBP7.87□□□□□ -1.15
ATXN3-219ENST00000553488 SLC39A12Q504Y0 691 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 TTC38Q5R3I4 469 aa7.87□□□□□ -1.15
ATXN3-219ENST00000553488 ZPBP2Q6X784 338 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms