RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 DPF3Q92784 378 aa18.44■□□□□ 0.54
PSEN1-206ENST00000553447 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
PSEN1-206ENST00000553447 PGLYRP2Q96PD5 576 aa18.44■□□□□ 0.54
PSEN1-206ENST00000553447 MTIF3Q9H2K0 278 aaKnown RBP18.44■□□□□ 0.54
PSEN1-206ENST00000553447 TTC7AQ9ULT0 858 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-206ENST00000553447 GREB1Q4ZG55 1949 aa18.44■□□□□ 0.54
PSEN1-206ENST00000553447 COL4A4P53420 1690 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-206ENST00000553447 MTMR11A4FU01 709 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 PGRMC1O00264 195 aaKnown RBP18.43■□□□□ 0.54
PSEN1-206ENST00000553447 TRIM66O15016 1216 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SART1O43290 800 aaKnown RBP18.43■□□□□ 0.54
PSEN1-206ENST00000553447 RNF8O76064 485 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 GLI1P08151 1106 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 PYGMP11217 842 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 TCF4P15884 667 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SDC4P31431 198 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 PTPN9P43378 593 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 GLUD2P49448 558 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 DSG1Q02413 1049 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 ITIH3Q06033 890 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SEL1L2Q5TEA6 688 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SLC8B1Q6J4K2 584 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SCN4BQ8IWT1 228 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 KATNAL2Q8IYT4 538 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SCML4Q8N228 414 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 FBXO22Q8NEZ5 403 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SPPL2BQ8TCT7 592 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 SP7Q8TDD2 431 aaPredicted RBP18.43■□□□□ 0.54
PSEN1-206ENST00000553447 C2orf15Q8WU43 125 aaKnown RBP18.43■□□□□ 0.54
PSEN1-206ENST00000553447 GOLGA1Q92805 767 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 ABHD8Q96I13 439 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 C8orf48Q96LL4 319 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 RAD9AQ99638 391 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.43■□□□□ 0.54
PSEN1-206ENST00000553447 PCDHB12Q9Y5F1 795 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 CDY1Q9Y6F8 540 aa18.43■□□□□ 0.54
PSEN1-206ENST00000553447 ZNF638Q14966 1978 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 GBF1Q92538 1859 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 VNN2O95498 520 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 ZBED1O96006 694 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 USP17L7P0C7H9 530 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 ATP2A2P16615 1042 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 DESP17661 470 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 PCK1P35558 622 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 GJC1P36383 396 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 YWHAZP63104 245 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 SLC25A11Q02978 314 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 HADHQ16836 314 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 C15orf59Q2T9L4 293 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 PM20D1Q6GTS8 502 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 AADACL2Q6P093 401 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 RNF19BQ6ZMZ0 732 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 RSRC2Q7L4I2 434 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 ATAD1Q8NBU5 361 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 SPATA4Q8NEY3 305 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 IRGQQ8WZA9 623 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 CLP1Q92989 425 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 FAM149B1Q96BN6 582 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 SLC2A13Q96QE2 648 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 DDX23Q9BUQ8 820 aaKnown RBP18.42■□□□□ 0.54
PSEN1-206ENST00000553447 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
PSEN1-206ENST00000553447 YJEFN3A6XGL0 299 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 E7ENQ6 273 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 TNFRSF10BO14763 440 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 ADAM12O43184 909 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 MIPP30301 263 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 MATKP42679 507 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 ROR1Q01973 937 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 C2orf54Q08AI8 447 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 CLUL1Q15846 466 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 CDO1Q16878 200 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 SH3PXD2AQ5TCZ1 1133 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 RASIP1Q5U651 963 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 HFE2Q6ZVN8 426 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 BHLHA9Q7RTU4 235 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 POLNQ7Z5Q5 900 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 DEFB106AQ8N104 65 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 EXD1Q8NHP7 514 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 NCAPGQ9BPX3 1015 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 C11orf84Q9BUA3 381 aaPredicted RBP18.41■□□□□ 0.54
PSEN1-206ENST00000553447 PLVAPQ9BX97 442 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 DDX56Q9NY93 547 aaKnown RBP18.41■□□□□ 0.54
PSEN1-206ENST00000553447 STK39Q9UEW8 545 aa18.41■□□□□ 0.54
PSEN1-206ENST00000553447 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.41■□□□□ 0.54
PSEN1-206ENST00000553447 V9GYY5 206 aaPredicted RBP18.41■□□□□ 0.54
PSEN1-206ENST00000553447 WDR27A2RRH5 827 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 C2CD2LO14523 706 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 TLL1O43897 1013 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 FGF18O76093 207 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 FGGP02679 453 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 URODP06132 367 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 KRT7P08729 469 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 HAPLN1P10915 354 aaPredicted RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 RPL17P18621 184 aaKnown RBP18.4■□□□□ 0.54
PSEN1-206ENST00000553447 OR1D2P34982 312 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 NOS2P35228 1153 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 GPR15P49685 360 aa18.4■□□□□ 0.54
PSEN1-206ENST00000553447 SLC5A3P53794 718 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms