RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 INCA1Q0VD86 236 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 SRSF5Q13243 272 aaKnown RBP16.83■□□□□ 0.28
CDK4-215ENST00000553237 KRT39Q6A163 491 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 ANKRD40Q6AI12 368 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 PDZD8Q8NEN9 1154 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 CD101Q93033 1021 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 TSG101Q99816 390 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 NT5C1AQ9BXI3 368 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
CDK4-215ENST00000553237 SPTBN4Q9H254 2564 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 HRO43593 1189 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 PAPSS2O95340 614 aaPredicted RBP16.82■□□□□ 0.28
CDK4-215ENST00000553237 NFATC1O95644 943 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 FAM200BP0CF97 657 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
CDK4-215ENST00000553237 DRD1P21728 446 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 PXNP49023 591 aaPredicted RBP16.82■□□□□ 0.28
CDK4-215ENST00000553237 PGFP49763 221 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 MXI1P50539 228 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 ZNF394Q53GI3 561 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 TCERG1LQ5VWI1 586 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 PRR23BQ6ZRT6 265 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 SPATA20Q8TB22 786 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 OVCA2Q8WZ82 227 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 EXOC4Q96A65 974 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 CYFIP2Q96F07 1278 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 CSNK1G1Q9HCP0 422 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
CDK4-215ENST00000553237 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
CDK4-215ENST00000553237 ZNF292O60281 2723 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 TRIM49BA6NDI0 452 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 CILPO75339 1184 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
CDK4-215ENST00000553237 FKBP3Q00688 224 aaKnown RBP16.81■□□□□ 0.28
CDK4-215ENST00000553237 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 DCAF17Q5H9S7 520 aaPredicted RBP16.81■□□□□ 0.28
CDK4-215ENST00000553237 GPRIN1Q7Z2K8 1008 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 LONP2Q86WA8 852 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 ADGRG2Q8IZP9 1017 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 FBXL13Q8NEE6 735 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 EZH1Q92800 747 aaPredicted RBP16.81■□□□□ 0.28
CDK4-215ENST00000553237 TATDN2Q93075 761 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
CDK4-215ENST00000553237 COMMD8Q9NX08 183 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
CDK4-215ENST00000553237 FAM92AA1XBS5 289 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 SLC9A3R1O14745 358 aaPredicted RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 STX10O60499 249 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 ATG13O75143 517 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 CYP17A1P05093 508 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 ZDHHC11BP0C7U3 371 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 ID4P47928 161 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 SIM2Q14190 667 aaPredicted RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 DHCR24Q15392 516 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 CBWD6Q4V339 395 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 CBWD3Q5JTY5 395 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 CBWD5Q5RIA9 395 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 SNX30Q5VWJ9 437 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 CLEC20AQ6ZU45 233 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 DDX42Q86XP3 938 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDK4-215ENST00000553237 RPLP0P6Q8NHW5 317 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 SECISBP2LQ93073 1101 aaKnown RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 ZFRQ96KR1 1074 aaKnown RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 HEXIM2Q96MH2 286 aaKnown RBP16.8■□□□□ 0.28
CDK4-215ENST00000553237 NACA2Q9H009 215 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 FBXO44Q9H4M3 255 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 MAN1B1Q9UKM7 699 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 SLC8A2Q9UPR5 921 aa16.8■□□□□ 0.28
CDK4-215ENST00000553237 ANTXRLA6NF34 631 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 HHLA1C9JL84 531 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 TBX18O95935 607 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 IRF1P10914 325 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
CDK4-215ENST00000553237 OPRD1P41143 372 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 SLC6A11P48066 632 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 GAB4Q2WGN9 574 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 FBXO43Q4G163 708 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
CDK4-215ENST00000553237 RHBDF2Q6PJF5 856 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 WDR5BQ86VZ2 330 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 ZC3H3Q8IXZ2 948 aaKnown RBP16.79■□□□□ 0.28
CDK4-215ENST00000553237 WBP2Q969T9 261 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 ARID3AQ99856 593 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 TLR8Q9NR97 1041 aaKnown RBP16.79■□□□□ 0.28
CDK4-215ENST00000553237 CISHQ9NSE2 258 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 GMEB2Q9UKD1 530 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 SH3BP1Q9Y3L3 701 aa16.79■□□□□ 0.28
CDK4-215ENST00000553237 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
CDK4-215ENST00000553237 CYP26A1O43174 497 aa16.78■□□□□ 0.28
CDK4-215ENST00000553237 TLR5O60602 858 aa16.78■□□□□ 0.28
CDK4-215ENST00000553237 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
CDK4-215ENST00000553237 HOXA6P31267 233 aa16.78■□□□□ 0.28
CDK4-215ENST00000553237 TUBP50607 506 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms