RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 GBP4Q96PP9 640 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 GCNAQ96QF7 691 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 USP28Q96RU2 1077 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 PLIN2Q99541 437 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 SEPT5Q99719 369 aaPredicted RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 P2RY13Q9BPV8 354 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 CBWD1Q9BRT8 395 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 LSM14BQ9BX40 385 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 DUSP15Q9H1R2 295 aaPredicted RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC32A1Q9H598 525 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM124BQ9H5Z6 455 aaPredicted RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 ECT2Q9H8V3 914 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 MRPL44Q9H9J2 332 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 FBRSL1Q9HCM7 1045 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 CSNK1G1Q9HCP0 422 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 CD248Q9HCU0 757 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 DDX43Q9NXZ2 648 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 RBAKQ9NYW8 714 aaPredicted RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 EVLQ9UI08 416 aaPredicted RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 AGAP1Q9UPQ3 857 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 STARD13Q9Y3M8 1113 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 GPSM3Q9Y4H4 160 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 RAI2Q9Y5P3 530 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 CLIC4Q9Y696 253 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 GON4LQ3T8J9 2241 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 ASCC3Q8N3C0 2202 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 WDFY3Q8IZQ1 3526 aa4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 MYO18AQ92614 2054 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 TNRC6BQ9UPQ9 1833 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-220ENST00000552561 PTPRJQ12913 1337 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PI4KAP42356 2102 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ABCA7Q8IZY2 2146 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 COL6A6A6NMZ7 2263 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TRAV19A0A0A6YYK7 116 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PVALEFA0A1B0GWK0 134 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM221BA6H8Z2 402 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ZNF840PA6NDX5 716 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 H0Y626 953 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 K7EQS6 105 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC9A3R1O14745 358 aaPredicted RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TNFRSF10BO14763 440 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TRIM66O15016 1216 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 AXIN1O15169 862 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 HOXC11O43248 304 aaPredicted RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 GDF9O60383 454 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 GREM1O60565 184 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TRIM16O95361 564 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 YEATS4O95619 227 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 NFATC1O95644 943 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 APBB3O95704 486 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 EGFP01133 1207 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 KRT18P05783 430 aaKnown RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CSRP1P21291 193 aaKnown RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CYP2F1P24903 491 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ATICP31939 592 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 MPLP40238 635 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 MATR3P43243 847 aaKnown RBP eCLIP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 KIR2DL1P43626 348 aaPredicted RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 GALK1P51570 392 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 BFSP1Q12934 665 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 MYO1EQ12965 1108 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PSMD6Q15008 389 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ZRSR1Q15695 479 aaKnown RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CRY1Q16526 586 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 DUOXA2Q1HG44 320 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FOXD4L6Q3SYB3 417 aaPredicted RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PMS2CLQ68D20 193 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TXNDC8Q6A555 127 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 SCARA3Q6AZY7 606 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ATL3Q6DD88 541 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 KLHDC10Q6PID8 442 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FOXD4L3Q6VB84 417 aaPredicted RBP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 DENND5BQ6ZUT9 1274 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 STXBP4Q6ZWJ1 553 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TRAPPC11Q7Z392 1133 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 DDX42Q86XP3 938 aaKnown RBP eCLIP4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CCDC65Q8IXS2 484 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ADGRF2Q8IZF7 708 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CSGALNACT2Q8N6G5 542 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 MAB21L3Q8N8X9 362 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TTC13Q8NBP0 860 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ZSWIM2Q8NEG5 633 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PDZD8Q8NEN9 1154 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 OR5B17Q8NGF7 314 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM200AQ8TCP9 573 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 CD101Q93033 1021 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PCED1BQ96HM7 432 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 LRIG1Q96JA1 1093 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC22A12Q96S37 553 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 C7orf25Q9BPX7 421 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 SYT15Q9BQS2 421 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM213AQ9BRX8 229 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 TMUB1Q9BVT8 246 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 FGFBP2Q9BYJ0 223 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 ELOVL4Q9GZR5 314 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 XYLT2Q9H1B5 865 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 IKZF4Q9H2S9 585 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 EBF3Q9H4W6 596 aa4.73□□□□□ -1.65
TMEM106C-220ENST00000552561 PDE11AQ9HCR9 933 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms