RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 ACOX2Q99424 681 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 GABRG3Q99928 467 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
SNRPF-204ENST00000552085 TMLHEQ9NVH6 421 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
SNRPF-204ENST00000552085 KCNJ14Q9UNX9 436 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 RAD54BQ9Y620 910 aa13.37□□□□□ -0.27
SNRPF-204ENST00000552085 H0Y8X5 98 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 CBX4O00257 560 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 KCNK3O14649 394 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 SCAMP3O14828 347 aaKnown RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 PAPSS1O43252 624 aaPredicted RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 TULP3O75386 442 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 MED24O75448 989 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 AFPP02771 609 aaKnown RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 MYF5P13349 255 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 PFKLP17858 780 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 CR2P20023 1033 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 RPS6KB1P23443 525 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 TXKP42681 527 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 NPTX2P47972 431 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 ACADVLP49748 655 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 GAD2Q05329 585 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 TEAD4Q15561 434 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 CALCRLQ16602 461 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 KIAA1614Q5VZ46 1190 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 ETFBKMTQ8IXQ9 262 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 NAT16Q8N8M0 369 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 CNDP2Q96KP4 475 aaKnown RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 ZNF578Q96N58 590 aaPredicted RBP13.36□□□□□ -0.27
SNRPF-204ENST00000552085 DEC1Q9P2X7 70 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
SNRPF-204ENST00000552085 MYH11P35749 1972 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 CYB561D2O14569 222 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 KLK10O43240 276 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 TOM1L1O75674 476 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 GLDCP23378 1020 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 CYP2F1P24903 491 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 PEX3P56589 373 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 IL9RQ01113 521 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 PPP2R3AQ06190 1150 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 NFE2Q16621 373 aaPredicted RBP13.35□□□□□ -0.27
SNRPF-204ENST00000552085 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 SPATA1Q5VX52 437 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 KCNE4Q8WWG9 221 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 RPF1Q9H9Y2 349 aaKnown RBP13.35□□□□□ -0.27
SNRPF-204ENST00000552085 ITM2CQ9NQX7 267 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 CREBBPQ92793 2442 aa13.35□□□□□ -0.27
SNRPF-204ENST00000552085 DOPEY1Q5JWR5 2465 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 PIRO00625 290 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 CLTAP09496 248 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 OXTRP30559 389 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 GRIA4P48058 902 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 SLC7A9P82251 487 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 TSPY1Q01534 308 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 EARS2Q5JPH6 523 aaKnown RBP13.34□□□□□ -0.27
SNRPF-204ENST00000552085 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
SNRPF-204ENST00000552085 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
SNRPF-204ENST00000552085 PYM1Q9BRP8 204 aaKnown RBP13.34□□□□□ -0.27
SNRPF-204ENST00000552085 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 TBC1D14Q9P2M4 693 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 SNX14Q9Y5W7 946 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 CPQQ9Y646 472 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 SLCO1B1Q9Y6L6 691 aa13.34□□□□□ -0.27
SNRPF-204ENST00000552085 ANO9A1A5B4 782 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 K7ENP7 123 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
SNRPF-204ENST00000552085 SUV39H1O43463 412 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 PSMA5P28066 241 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 NFKB2Q00653 900 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 INO80CQ6PI98 192 aaPredicted RBP13.33□□□□□ -0.28
SNRPF-204ENST00000552085 EXD3Q8N9H8 876 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 SNX19Q92543 992 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
SNRPF-204ENST00000552085 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 RNF38Q9H0F5 515 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 KMT5AQ9NQR1 393 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 SMPD4Q9NXE4 827 aa13.33□□□□□ -0.28
SNRPF-204ENST00000552085 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
SNRPF-204ENST00000552085 NOTCH2Q04721 2471 aa13.32□□□□□ -0.28
SNRPF-204ENST00000552085 LAD1O00515 517 aa13.32□□□□□ -0.28
SNRPF-204ENST00000552085 CPLX1O14810 134 aa13.32□□□□□ -0.28
SNRPF-204ENST00000552085 TRIM24O15164 1050 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms