RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 DEFB119Q8N690 84 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 DPEP3Q9H4B8 488 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 UPK3BL1B0FP48 263 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 UPK3BL2E5RIL1 263 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 ADH1CP00326 375 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 MBL2P11226 248 aaPredicted RBP23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 LYSMD4Q5XG99 296 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 PGBD3Q8N328 593 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 NAT16Q8N8M0 369 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 ZCCHC14Q8WYQ9 949 aaKnown RBP23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 HPS3Q969F9 1004 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 B3GNT5Q9BYG0 378 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 ZNF518BQ9C0D4 1074 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 MSRB2Q9Y3D2 182 aa23.05■■□□□ 1.28
SMARCD1-212ENST00000551966 CLDN5O00501 218 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 KIAA0391O15091 583 aaKnown RBP23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 TACC1O75410 805 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 FAM193AP78312 1265 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 IFRD2Q12894 506 aaPredicted RBP23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 BYSLQ13895 437 aaKnown RBP23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 SURF1Q15526 300 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 FAM173BQ6P4H8 233 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 LRSAM1Q6UWE0 723 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 ETFBKMTQ8IXQ9 262 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 OR6B3Q8NGW1 331 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 WBP2Q969T9 261 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 SNX25Q9H3E2 840 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 TBC1D14Q9P2M4 693 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 CHORDC1Q9UHD1 332 aaPredicted RBP23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 SLC6A14Q9UN76 642 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 ADAMTS9Q9P2N4 1935 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 PLXND1Q9Y4D7 1925 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 GON4LQ3T8J9 2241 aa23.04■■□□□ 1.28
SMARCD1-212ENST00000551966 IGF2RP11717 2491 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 E2F8A0AVK6 867 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 COCHO43405 550 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 FAM163BP0C2L3 166 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 GABRG2P18507 467 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 SIM1P81133 766 aaPredicted RBP23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 GAD2Q05329 585 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 RING1Q06587 406 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 DDX42Q86XP3 938 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 WDR49Q8IV35 697 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 SLITRK1Q96PX8 696 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 HSPBP1Q9NZL4 362 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 PI4KAP42356 2102 aa23.03■■□□□ 1.28
SMARCD1-212ENST00000551966 WDFY3Q8IZQ1 3526 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 TBC1D3BA6NDS4 549 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 TAF4O00268 1085 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 TRIM24O15164 1050 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 TULP3O75386 442 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 CFIP05156 583 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 YWHAQP27348 245 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 CEBPZQ03701 1054 aaKnown RBP23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 DUOXA1Q1HG43 343 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 CCDC73Q6ZRK6 1079 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 MIB1Q86YT6 1006 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 NUP93Q8N1F7 819 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 RDH13Q8NBN7 331 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 KCNK16Q96T55 309 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 CAPN10Q9HC96 672 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 BAHCC1Q9P281 2608 aa23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 MYO18AQ92614 2054 aaKnown RBP23.02■■□□□ 1.28
SMARCD1-212ENST00000551966 FAM221BA6H8Z2 402 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 CAPNS1P04632 268 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 SERPINF2P08697 491 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 TXLNAP40222 546 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 STAT6P42226 847 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 DPP6P42658 865 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 WDR72Q3MJ13 1102 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 TMEM25Q86YD3 366 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 ZNF513Q8N8E2 541 aaPredicted RBP23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 OR2I1PQ8NGU4 316 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 SCAMP5Q8TAC9 235 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 ZNF516Q92618 1163 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 OTUB2Q96DC9 234 aa23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 GTPBP2Q9BX10 602 aaKnown RBP23.01■■□□□ 1.27
SMARCD1-212ENST00000551966 CEP192Q8TEP8 1941 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 A0A1W2PQF6 199 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 VPS37CA5D8V6 355 aaPredicted RBP23■■□□□ 1.27
SMARCD1-212ENST00000551966 AP5Z1O43299 807 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 HOXD12P35452 270 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 WASP42768 502 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 RPL6Q02878 288 aaKnown RBP23■■□□□ 1.27
SMARCD1-212ENST00000551966 ZNF33AQ06730 810 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 PAQR9Q6ZVX9 377 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 BBS7Q8IWZ6 715 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 CCDC65Q8IXS2 484 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 CHCHD4Q8N4Q1 142 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 CEP76Q8TAP6 659 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 KCNV2Q8TDN2 545 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 FBXO32Q969P5 355 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 ELOVL4Q9GZR5 314 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 GZF1Q9H116 711 aaPredicted RBP23■■□□□ 1.27
SMARCD1-212ENST00000551966 CCSER2Q9H7U1 834 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 CD248Q9HCU0 757 aa23■■□□□ 1.27
SMARCD1-212ENST00000551966 CALCOCO1Q9P1Z2 691 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms