RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 FAM83CQ9BQN1 747 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 EBF3Q9H4W6 596 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 GKN1Q9NS71 199 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 DPP3Q9NY33 737 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 OBP2AQ9NY56 170 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 KCNG1Q9UIX4 513 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 AGO2Q9UKV8 859 aaKnown RBP9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 L1RE1Q9UN81 338 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 DERAQ9Y315 318 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 LAMA1P25391 3075 aa9.38□□□□□ -0.91
ATP2B1-207ENST00000550716 CHD6Q8TD26 2715 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 SIN3BO75182 1162 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 EGFP01133 1207 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 PTMSP20962 102 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CDC25CP30307 473 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 TUFMP49411 452 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CASP5P51878 434 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 NLRP12P59046 1061 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 VEPH1Q14D04 833 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CEP68Q76N32 757 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 DYMQ7RTS9 669 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 KBTBD6Q86V97 674 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CMTM8Q8IZV2 173 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 PDCL2Q8N4E4 241 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 LARP4BQ92615 738 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 BHMTQ93088 406 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 SAAL1Q96ER3 474 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CALML4Q96GE6 196 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 SLC22A12Q96S37 553 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 PKMYT1Q99640 499 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 STRA6Q9BX79 667 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 CCSER1Q9C0I3 900 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 ASB7Q9H672 318 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 TBC1D7Q9P0N9 293 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 HSFX1Q9UBD0 423 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 DMGDHQ9UI17 866 aaKnown RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 SCN1AP35498 2009 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
ATP2B1-207ENST00000550716 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 CNOT1A5YKK6 2376 aaKnown RBP9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 GOLGA8IPA6NC78 632 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 MYMKA6NI61 221 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 GOLGA8JA6NMD2 632 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 KPNA7A9QM74 516 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 SLC26A4O43511 780 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 LRP3O75074 770 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 FGF19O95750 216 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 EPB42P16452 691 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 SDHBP21912 280 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 POLR2BP30876 1174 aaKnown RBP9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 LONP1P36776 959 aaKnown RBP9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 KRT85P78386 507 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 RUNX3Q13761 415 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 PTPAQ15257 358 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 DDR2Q16832 855 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 TMEM196Q5HYL7 178 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 COX20Q5RI15 118 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 C1orf228Q6PIY5 440 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 ZNF720Q7Z2F6 126 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 C1orf127Q8N9H9 656 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 RASSF8Q8NHQ8 419 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 SPPL2BQ8TCT7 592 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 CLIC6Q96NY7 704 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 HHIPQ96QV1 700 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 TSPAN18Q96SJ8 248 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 FAM213AQ9BRX8 229 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 ST6GALNAC4Q9H4F1 302 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 SIX4Q9UIU6 781 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 DSEQ9UL01 958 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 MAGED2Q9UNF1 606 aaPredicted RBP9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 CLIC4Q9Y696 253 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 SDK1Q7Z5N4 2213 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 ANK1P16157 1881 aa9.36□□□□□ -0.91
ATP2B1-207ENST00000550716 MYH11P35749 1972 aa9.35□□□□□ -0.91
ATP2B1-207ENST00000550716 PTPRJQ12913 1337 aa9.35□□□□□ -0.91
ATP2B1-207ENST00000550716 A0A087X0B3 334 aa9.35□□□□□ -0.91
ATP2B1-207ENST00000550716 DCLK1O15075 740 aa9.35□□□□□ -0.91
ATP2B1-207ENST00000550716 PRPF40AO75400 957 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms