RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 GLUD2P49448 558 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 RTP1P59025 263 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 SATB1Q01826 763 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 MEA1Q16626 185 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CACUL1Q86Y37 369 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF557Q8N988 423 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF473Q8WTR7 871 aaKnown RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZFATQ9P243 1243 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 LGR5O75473 907 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ATP5BP06576 529 aaKnown RBP12.66□□□□□ -0.38
NR4A1-215ENST00000550557 PRLRP16471 622 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 VEGFBP49765 207 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 SGCGQ13326 291 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 CAPSQ13938 189 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 WSCD1Q658N2 575 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 FGD4Q96M96 766 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 SERPINB11Q96P15 392 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF212Q9UDV6 495 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 CST8O60676 142 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 RPSAP08865 295 aaKnown RBP12.66□□□□□ -0.38
NR4A1-215ENST00000550557 CDR2Q01850 454 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 HSP90AA5PQ58FG0 334 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
NR4A1-215ENST00000550557 RASSF3Q86WH2 238 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ZBTB18Q99592 522 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 DUSP10Q9Y6W6 482 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 HTRA3P83110 453 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 PDIA2Q13087 525 aaKnown RBP12.66□□□□□ -0.38
NR4A1-215ENST00000550557 CFAP61Q8NHU2 1237 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
NR4A1-215ENST00000550557 COPEO14579 308 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 DARSP14868 501 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CYP2C18P33260 490 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 OCRLQ01968 901 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ACAD10Q6JQN1 1059 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 SPATA17Q96L03 361 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 TTPALQ9BTX7 342 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CDT1Q9H211 546 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 GTF3C4Q9UKN8 822 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 PMPCBO75439 489 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 RBP3P10745 1247 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 OR1D2P34982 312 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ATP5C1P36542 298 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 PBX1P40424 430 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 PMS2P54278 862 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 TUSC3Q13454 348 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 LBRQ14739 615 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ZKSCAN8Q15776 578 aaPredicted RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 KLHL38Q2WGJ6 581 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 KLHL29Q96CT2 875 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 RRN3Q9NYV6 651 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 SOWAHBA6NEL2 793 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF263O14978 683 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CARSP49589 748 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 FBXW10Q5XX13 1052 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CCNYL1Q8N7R7 359 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 AHDC1Q5TGY3 1603 aaPredicted RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 VCLP18206 1134 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CYP3A7P24462 503 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 GCKP35557 465 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 CDH8P55286 799 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 KCNK18Q7Z418 384 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 PDZD8Q8NEN9 1154 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
NR4A1-215ENST00000550557 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
NR4A1-215ENST00000550557 A0A087X0T9 212 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 PRPF4O43172 522 aaKnown RBP eCLIP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 DDHD2O94830 711 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 MYO1DO94832 1006 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 FAM228BP0C875 321 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 CYP11B1P15538 503 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 LSP1P33241 339 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 NPY5RQ15761 445 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 HP1BP3Q5SSJ5 553 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms