RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SLCO2A1Q92959 643 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 RTP3Q9BQQ7 232 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 LRRC1Q9BTT6 524 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 LRRC19Q9H756 370 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.17□□□□□ -0.3
CACNB3-217ENST00000550483 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
CACNB3-217ENST00000550483 TSC2P49815 1807 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 FAM170AA1A519 330 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TRIM66O15016 1216 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 MDM4O15151 490 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 HCRTO43612 131 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 ATP2C2O75185 946 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 DGKIO75912 1065 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 LCP1P13796 627 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 NOS2P35228 1153 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 MAGEA11P43364 429 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TAS2R40P59535 323 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 DEFB128Q7Z7B8 93 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 CENPIQ92674 756 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 USP18Q9UMW8 372 aa13.16□□□□□ -0.3
CACNB3-217ENST00000550483 PRG3Q9Y2Y8 225 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-217ENST00000550483 TULP2O00295 520 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 HEXIM1O94992 359 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 GJB6O95452 261 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 TRUB2O95900 331 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 F9P00740 461 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 GALTP07902 379 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 RAG1P15918 1043 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 MIPP30301 263 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 FLT3P36888 993 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 ALDH7A1P49419 539 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 CLCN6P51797 869 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 TKTL1P51854 596 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 ZNF135P52742 658 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 DRG2P55039 364 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 DR1Q01658 176 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 KLF1Q13351 362 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 NNTQ13423 1086 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 TFDP2Q14188 446 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 CCNG2Q16589 344 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 LRRC26Q2I0M4 334 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 CCDC14Q49A88 953 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SPOCD1Q6ZMY3 1216 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 KLHL7Q8IXQ5 586 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 EMC1Q8N766 993 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 OR10T2Q8NGX3 314 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SPPL2BQ8TCT7 592 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 CCHCR1Q8TD31 782 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 TOP1MTQ969P6 601 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 PNKPQ96T60 521 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 SMOQ99835 787 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
CACNB3-217ENST00000550483 ACBD3Q9H3P7 528 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 GDF3Q9NR23 364 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 MUC3AQ02505 3323 aa13.15□□□□□ -0.3
CACNB3-217ENST00000550483 LRRD1A4D1F6 860 aa13.14□□□□□ -0.31
CACNB3-217ENST00000550483 I3L4J1 428 aa13.14□□□□□ -0.31
CACNB3-217ENST00000550483 CLDN5O00501 218 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms