RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ARHGAP26Q9UNA1 814 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 CPQQ9Y646 472 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 R4GN57 208 aa10.35□□□□□ -0.75
HDAC7-229ENST00000549883 FAM92AA1XBS5 289 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 LEFTY2O00292 366 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 MAN2B1O00754 1011 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 MDM4O15151 490 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 ZDHHC11BP0C7U3 371 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 SP9P0CG40 484 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 ACO1P21399 889 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 MARSP56192 900 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 SLC7A9P82251 487 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 GOLGA7BQ2TAP0 167 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 GAB4Q2WGN9 574 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 EML3Q32P44 896 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 FSTL4Q6MZW2 842 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 PKN3Q6P5Z2 889 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 GJB7Q6PEY0 223 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 SCD5Q86SK9 330 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 TTC30AQ86WT1 665 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 UBA3Q8TBC4 463 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 NDRG1Q92597 394 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 EZH1Q92800 747 aaPredicted RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 CNOT6LQ96LI5 555 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 KREMEN1Q96MU8 473 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 IPO9Q96P70 1041 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 SLITRK1Q96PX8 696 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 DUSP16Q9BY84 665 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 NUP62CLQ9H1M0 184 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 KIF9Q9HAQ2 790 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 DUS2Q9NX74 493 aaKnown RBP10.34□□□□□ -0.75
HDAC7-229ENST00000549883 CFAP97Q9P2B7 532 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 RWDD2AQ9UIY3 292 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 ZMYM5Q9UJ78 669 aa10.34□□□□□ -0.75
HDAC7-229ENST00000549883 VPS13AQ96RL7 3174 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 GABBR2O75899 941 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 NBL1P41271 181 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 MESP2Q0VG99 397 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 HECTD3Q5T447 861 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 SNX30Q5VWJ9 437 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 CC2D1AQ6P1N0 951 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 PIGZQ86VD9 579 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 RALGPS2Q86X27 583 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 SFTPA1Q8IWL2 248 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 OSCP1Q8WVF1 389 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 NT5C1BQ96P26 610 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 NELL2Q99435 816 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 CRACR2AQ9BSW2 395 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 INTS2Q9H0H0 1204 aaKnown RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 CHRDQ9H2X0 955 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 C8orf33Q9H7E9 229 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 ECT2Q9H8V3 914 aa10.33□□□□□ -0.76
HDAC7-229ENST00000549883 AJAP1Q9UKB5 411 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 MRPS17Q9Y2R5 130 aaKnown RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 MYO18AQ92614 2054 aaKnown RBP10.33□□□□□ -0.76
HDAC7-229ENST00000549883 EML5Q05BV3 1969 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 O00370 1275 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PMM2O15305 246 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 EGFP01133 1207 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 AFPP02771 609 aaKnown RBP10.32□□□□□ -0.76
HDAC7-229ENST00000549883 IRF1P10914 325 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 CD19P15391 556 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 TCF3P15923 654 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 SLC9A1P19634 815 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 BRD2P25440 801 aaKnown RBP10.32□□□□□ -0.76
HDAC7-229ENST00000549883 GJA4P35212 333 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PPP3CCP48454 512 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 IFNAR2P48551 515 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 GALK1P51570 392 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 KIF11P52732 1056 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 MLLT6P55198 1093 aaPredicted RBP10.32□□□□□ -0.76
HDAC7-229ENST00000549883 SATB1Q01826 763 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 CSTF1Q05048 431 aaKnown RBP10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PDE4CQ08493 712 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 DMWDQ09019 674 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 CCINQ13939 588 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 ARHGAP17Q68EM7 881 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 TMEM270Q6UE05 265 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PPM1KQ8N3J5 372 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 MLKLQ8NB16 471 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PDZD8Q8NEN9 1154 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 OVCA2Q8WZ82 227 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 FAXDC2Q96IV6 333 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 ACP6Q9NPH0 428 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 COMMD8Q9NX08 183 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 EHD2Q9NZN4 543 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 TSPAN16Q9UKR8 245 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 SCML2Q9UQR0 700 aa10.32□□□□□ -0.76
HDAC7-229ENST00000549883 PCDHB4Q9Y5E5 795 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms