RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 LAIR1Q6GTX8 287 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 WDR5BQ86VZ2 330 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 GPR161Q8N6U8 529 aaKnown RBP20.69■□□□□ 0.9
ATF1-202ENST00000549612 C12orf29Q8N999 325 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 EZH1Q92800 747 aaPredicted RBP20.69■□□□□ 0.9
ATF1-202ENST00000549612 TWNKQ96RR1 684 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.69■□□□□ 0.91e-7■■■■■ 115.4
ATF1-202ENST00000549612 FAM49BQ9NUQ9 324 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 SMPD4Q9NXE4 827 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 RAB23Q9ULC3 237 aa20.69■□□□□ 0.9
ATF1-202ENST00000549612 SLC9A3R1O14745 358 aaPredicted RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 CETN3O15182 167 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 COCHO43405 550 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 BEST1O76090 585 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 MBL2P11226 248 aaPredicted RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 TRIM21P19474 475 aaKnown RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 HOXC13P31276 330 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 PRCPP42785 496 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 GAB4Q2WGN9 574 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 HECTD3Q5T447 861 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 ZNF658Q5TYW1 1059 aaPredicted RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 HEATR6Q6AI08 1181 aaKnown RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 FILIP1Q7Z7B0 1213 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 FAXDC2Q96IV6 333 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 ZFRQ96KR1 1074 aaKnown RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 HNRNPABQ99729 332 aaKnown RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 NT5C1AQ9BXI3 368 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 MMRN2Q9H8L6 949 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 GMIPQ9P107 970 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 CFAP97Q9P2B7 532 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 CHORDC1Q9UHD1 332 aaPredicted RBP20.68■□□□□ 0.9
ATF1-202ENST00000549612 GMEB2Q9UKD1 530 aa20.68■□□□□ 0.9
ATF1-202ENST00000549612 CCDC163A0A0D9SF12 145 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 CILPO75339 1184 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 SMC2O95347 1197 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 CYP17A1P05093 508 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 FAM200BP0CF97 657 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 EPB41P11171 864 aaKnown RBP20.67■□□□□ 0.9
ATF1-202ENST00000549612 OPRD1P41143 372 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 MXI1P50539 228 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 MAP3K7CLP57077 242 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 SIM2Q14190 667 aaPredicted RBP20.67■□□□□ 0.9
ATF1-202ENST00000549612 ZC3H3Q8IXZ2 948 aaKnown RBP20.67■□□□□ 0.9
ATF1-202ENST00000549612 ADGRG2Q8IZP9 1017 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 CCDC150Q8NCX0 1101 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 WHAMMQ8TF30 809 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 RMDN1Q96DB5 314 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 EEF2KMTQ96G04 330 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 TIGD1Q96MW7 591 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 GTPBP4Q9BZE4 634 aaKnown RBP20.67■□□□□ 0.9
ATF1-202ENST00000549612 FBXO44Q9H4M3 255 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 SLC8A2Q9UPR5 921 aa20.67■□□□□ 0.9
ATF1-202ENST00000549612 E2F8A0AVK6 867 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 STX10O60499 249 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 TGM1P22735 817 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 ADORA2BP29275 332 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 SRSF5Q13243 272 aaKnown RBP20.66■□□□□ 0.9
ATF1-202ENST00000549612 LPAL2Q16609 132 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 PRR23BQ6ZRT6 265 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 CLEC20AQ6ZU45 233 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 FBXL13Q8NEE6 735 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 SEMA4DQ92854 862 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 DUSP9Q99956 384 aaKnown RBP20.66■□□□□ 0.9
ATF1-202ENST00000549612 CCSER2Q9H7U1 834 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 PNPLA8Q9NP80 782 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 PCDHA5Q9Y5H7 936 aa20.66■□□□□ 0.9
ATF1-202ENST00000549612 HHLA1C9JL84 531 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 SLC16A3O15427 465 aaKnown RBP20.65■□□□□ 0.9
ATF1-202ENST00000549612 CD58P19256 250 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 FOXK2Q01167 660 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 DHCR24Q15392 516 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 ERMP1Q7Z2K6 904 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 CAMKK1Q8N5S9 505 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 RPLP0P6Q8NHW5 317 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 CCDC26Q8TAB7 109 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 SMARCE1Q969G3 411 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 ACDQ96AP0 544 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 CYFIP2Q96F07 1278 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 TSG101Q99816 390 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 TBC1D14Q9P2M4 693 aa20.65■□□□□ 0.9
ATF1-202ENST00000549612 HOOK1Q9UJC3 728 aaKnown RBP20.65■□□□□ 0.9
ATF1-202ENST00000549612 SCAMP3O14828 347 aaKnown RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 RETP07949 1114 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 PGFP49763 221 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 SYT13Q7L8C5 426 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 GPRIN1Q7Z2K8 1008 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 ELOA2Q8IYF1 753 aaPredicted RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 TTC39CQ8N584 583 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 ERCC4Q92889 916 aaPredicted RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 OTUB2Q96DC9 234 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 DNAI2Q9GZS0 605 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 FAM124BQ9H5Z6 455 aaPredicted RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 TLR8Q9NR97 1041 aaKnown RBP20.64■□□□□ 0.89
ATF1-202ENST00000549612 RAB20Q9NX57 234 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 SCML2Q9UQR0 700 aa20.64■□□□□ 0.89
ATF1-202ENST00000549612 TLR5O60602 858 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 LRP3O75074 770 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 ADH1CP00326 375 aa20.63■□□□□ 0.89
ATF1-202ENST00000549612 EIF2DP41214 584 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms