RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SPOPLQ6IQ16 392 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 TTC9BQ8N6N2 239 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 KDF1Q8NAX2 398 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 TMEM121BQ9BXQ6 578 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 SDCBP2Q9H190 292 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 SMYD3Q9H7B4 428 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CYP3A43Q9HB55 503 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 CRTAC1Q9NQ79 661 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 DMXL2Q8TDJ6 3036 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 GON4LQ3T8J9 2241 aa16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 ASCC3Q8N3C0 2202 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-206ENST00000549139 PCNX2A6NKB5 2137 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 PTPN1P18031 435 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 MPLP40238 635 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 ASPAP45381 313 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 FMO5P49326 533 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 UNQ6494/PRO21346Q6UXR6 183 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 UNC93AQ86WB7 457 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 SPATA2LQ8IUW3 424 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 MYCBPAPQ8TBZ2 947 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 PSMG2Q969U7 264 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 CHFRQ96EP1 664 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 SEPT5Q99719 369 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 ZMIZ1Q9ULJ6 1067 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 OBSL1O75147 1896 aa16.71■□□□□ 0.27
CHMP1A-206ENST00000549139 P4HA2O15460 535 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 SOAT2O75908 522 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 CYP2F1P24903 491 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 MAGEA11P43364 429 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 CDR1P51861 262 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 PSMC1P62191 440 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 PSAPL1Q6NUJ1 521 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 SCARA5Q6ZMJ2 495 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 DNAJB7Q7Z6W7 309 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 TNIP3Q96KP6 325 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 NIF3L1Q9GZT8 377 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 NUP205Q92621 2012 aa16.7■□□□□ 0.26
CHMP1A-206ENST00000549139 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 ATF6P18850 670 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 VEPH1Q14D04 833 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 PLK5Q496M5 336 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 RNF43Q68DV7 783 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 TCEAL6Q6IPX3 200 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 FSTL4Q6MZW2 842 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 VSTM1Q6UX27 236 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 CRYBG2Q8N1P7 616 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 B3GALNT2Q8NCR0 500 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 TATDN2Q93075 761 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 TCEAL3Q969E4 200 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 MYLPFQ96A32 169 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 ATXN3LQ9H3M9 355 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 DPEP3Q9H4B8 488 aa16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 FAM124BQ9H5Z6 455 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.262e-11■■■■■ 173.1
CHMP1A-206ENST00000549139 POLR3BQ9NW08 1133 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHMP1A-206ENST00000549139 DPYSL4O14531 572 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 GIPC1O14908 333 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 FGF19O95750 216 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 GABRR2P28476 465 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 NDST1P52848 882 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 CYP27A1Q02318 531 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 INCA1Q0VD86 236 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 CETN1Q12798 172 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 CCDC142Q17RM4 750 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 ITPRIPL2Q3MIP1 535 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 IRF2BP1Q8IU81 584 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 CEP295NLQ96MC4 621 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 LPIN3Q9BQK8 851 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 FAM83CQ9BQN1 747 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 DUSP15Q9H1R2 295 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 THAP9Q9H5L6 903 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 TASP1Q9H6P5 420 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 IL21Q9HBE4 155 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
CHMP1A-206ENST00000549139 OTOL1A6NHN0 477 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-206ENST00000549139 ATG13O75143 517 aa16.67■□□□□ 0.26
CHMP1A-206ENST00000549139 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms