RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SCAMP5Q8TAC9 235 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 USP33Q8TEY7 942 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 LOXL4Q96JB6 756 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 MED10Q9BTT4 135 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 IL37Q9NZH6 218 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 TRAF3IP3Q9Y228 551 aa18.46■□□□□ 0.55
CHMP1A-205ENST00000548650 FAM92AA1XBS5 289 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 DCDC2BA2VCK2 349 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 ANTXRLA6NF34 631 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 K7EQS6 105 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 SLC9A3R1O14745 358 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 COCHO43405 550 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 GDF9O60383 454 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 RHOBTB3O94955 611 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 APBB3O95704 486 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 CHRM1P11229 460 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 SYKP43405 635 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 DHCR24Q15392 516 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 SNX30Q5VWJ9 437 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 CEP135Q66GS9 1140 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 SPOPLQ6IQ16 392 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 TAF4BQ92750 862 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 GMIPQ9P107 970 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 EBF1Q9UH73 591 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 NUP205Q92621 2012 aa18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 CNOT1A5YKK6 2376 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-205ENST00000548650 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 FOXD2O60548 495 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 AP1G2O75843 785 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 HLA-DRAP01903 254 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 ZDHHC11BP0C7U3 371 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 P4HA1P13674 534 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 PIK3CAP42336 1068 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 TUBP50607 506 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 NDST1P52848 882 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 DPYDQ12882 1025 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 SGSM1Q2NKQ1 1148 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 C12orf40Q86WS4 652 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 CCDC26Q8TAB7 109 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 SLC2A14Q8TDB8 520 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 ZC3H10Q96K80 434 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 SMOQ99835 787 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 ARRDC1-AS1Q9H2J1 176 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 GOLPH3LQ9H4A5 285 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 CCSER2Q9H7U1 834 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 CSNK1G1Q9HCP0 422 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 FAM49BQ9NUQ9 324 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 FRMD4BQ9Y2L6 1034 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 PLXND1Q9Y4D7 1925 aa18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 TPRP12270 2363 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-205ENST00000548650 IKBKBO14920 756 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 MAPK13O15264 365 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 BEST1O76090 585 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 ADH1CP00326 375 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 NR2F2P24468 414 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 EIF2DP41214 584 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 SEC13P55735 322 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 INCA1Q0VD86 236 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 SF3A2Q15428 464 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 CCDC6Q16204 474 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 NFIL3Q16649 462 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 PLK5Q496M5 336 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 C2orf27AQ580R0 203 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 HECTD3Q5T447 861 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 RHBDF2Q6PJF5 856 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 UNC93AQ86WB7 457 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 SFTPA1Q8IWL2 248 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 CRYBG2Q8N1P7 616 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 TSTD1Q8NFU3 115 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 TWNKQ96RR1 684 aa18.43■□□□□ 0.54
CHMP1A-205ENST00000548650 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 E2F8A0AVK6 867 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 KIF20AO95235 890 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 TRIM49P0CI25 452 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 TRIM49CP0CI26 452 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 ADH5P11766 374 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 PGFP49763 221 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 VAMP7P51809 220 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 PPP3CAQ08209 521 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 ZCWPW2Q504Y3 356 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 PLA2G2CQ5R387 149 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 KRBA2Q6ZNG9 492 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 C12orf29Q8N999 325 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 DUSP9Q99956 384 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 DUSP15Q9H1R2 295 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 APOBEC3GQ9HC16 384 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 COMMD8Q9NX08 183 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 TBC1D14Q9P2M4 693 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 CHORDC1Q9UHD1 332 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 MMP17Q9ULZ9 603 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 ACACBO00763 2458 aa18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 TNRC6BQ9UPQ9 1833 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 MYO18AQ92614 2054 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-205ENST00000548650 ABCA7Q8IZY2 2146 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms