RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 KCNK16Q96T55 309 aa21.63■■□□□ 1.05
SSH1-207ENST00000547862 SDCBP2Q9H190 292 aa21.63■■□□□ 1.05
SSH1-207ENST00000547862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.63■■□□□ 1.05
SSH1-207ENST00000547862 EBF1Q9UH73 591 aa21.63■■□□□ 1.05
SSH1-207ENST00000547862 SERTAD1Q9UHV2 236 aa21.63■■□□□ 1.05
SSH1-207ENST00000547862 MMP17Q9ULZ9 603 aa21.63■■□□□ 1.05
SSH1-207ENST00000547862 MAP1BP46821 2468 aaKnown RBP21.63■■□□□ 1.05
SSH1-207ENST00000547862 TNRC6BQ9UPQ9 1833 aaKnown RBP21.62■■□□□ 1.05
SSH1-207ENST00000547862 RTN3O95197 1032 aaPredicted RBP21.62■■□□□ 1.05
SSH1-207ENST00000547862 KLF8O95600 359 aaPredicted RBP21.62■■□□□ 1.05
SSH1-207ENST00000547862 CAVIN2O95810 425 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 ADH1CP00326 375 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 APODP05090 189 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 CCDC130P13994 396 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 SLC5A3P53794 718 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 NCOA4Q13772 614 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 USP39Q53GS9 565 aaKnown RBP21.62■■□□□ 1.05
SSH1-207ENST00000547862 DDX42Q86XP3 938 aaKnown RBP eCLIP21.62■■□□□ 1.05
SSH1-207ENST00000547862 C12orf56Q8IXR9 622 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 TXNDC5Q8NBS9 432 aaKnown RBP21.62■■□□□ 1.05
SSH1-207ENST00000547862 MDGA1Q8NFP4 955 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 CCDC26Q8TAB7 109 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 SCAMP5Q8TAC9 235 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 GMIPQ9P107 970 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 BCCIPQ9P287 314 aaKnown RBP eCLIP21.62■■□□□ 1.05
SSH1-207ENST00000547862 SH3BP1Q9Y3L3 701 aa21.62■■□□□ 1.05
SSH1-207ENST00000547862 COCHO43405 550 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 AP1G2O75843 785 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 STAU1O95793 577 aaKnown RBP21.61■■□□□ 1.05
SSH1-207ENST00000547862 DHPSP49366 369 aaPredicted RBP21.61■■□□□ 1.05
SSH1-207ENST00000547862 PKP1Q13835 747 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 CYP2U1Q7Z449 544 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 ACOT1Q86TX2 421 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 KIAA0895Q8NCT3 520 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 PDZD8Q8NEN9 1154 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 JAKMIP2Q96AA8 810 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 SMARCD1Q96GM5 515 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 PNKPQ96T60 521 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 NACA2Q9H009 215 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 CCSER2Q9H7U1 834 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 DMAP1Q9NPF5 467 aaPredicted RBP21.61■■□□□ 1.05
SSH1-207ENST00000547862 ARHGEF4Q9NR80 690 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 CGNQ9P2M7 1197 aaKnown RBP21.61■■□□□ 1.05
SSH1-207ENST00000547862 HMGXB4Q9UGU5 601 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 CHORDC1Q9UHD1 332 aaPredicted RBP21.61■■□□□ 1.05
SSH1-207ENST00000547862 EPG5Q9HCE0 2579 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 CEP192Q8TEP8 1941 aa21.61■■□□□ 1.05
SSH1-207ENST00000547862 PVALEFA0A1B0GWK0 134 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 BCLAF3A2AJT9 711 aaKnown RBP21.6■■□□□ 1.05
SSH1-207ENST00000547862 KAT7O95251 611 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 HNRNPLP14866 589 aaKnown RBP eCLIP21.6■■□□□ 1.05
SSH1-207ENST00000547862 DLG4P78352 724 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 DNM1Q05193 864 aaKnown RBP21.6■■□□□ 1.05
SSH1-207ENST00000547862 ST3GAL2Q16842 350 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 LY6G5CQ5SRR4 150 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 N4BP2L1Q5TBK1 243 aaPredicted RBP21.6■■□□□ 1.05
SSH1-207ENST00000547862 PMS2CLQ68D20 193 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 TMEM92Q6UXU6 159 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 ARMCX6Q7L4S7 300 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 ADGRG2Q8IZP9 1017 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 NAT16Q8N8M0 369 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 GOLGA5Q8TBA6 731 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 RLN3Q8WXF3 142 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 TNIP3Q96KP6 325 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 CNOT6LQ96LI5 555 aaKnown RBP21.6■■□□□ 1.05
SSH1-207ENST00000547862 FAM49BQ9NUQ9 324 aa21.6■■□□□ 1.05
SSH1-207ENST00000547862 MYO18AQ92614 2054 aaKnown RBP21.6■■□□□ 1.05
SSH1-207ENST00000547862 PLXND1Q9Y4D7 1925 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 VNN1O95497 513 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 PIK3CAP42336 1068 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 CRY1Q16526 586 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 KMT5BQ4FZB7 885 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 HECTD3Q5T447 861 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 EMC10Q5UCC4 262 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 CEP135Q66GS9 1140 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 PSAPL1Q6NUJ1 521 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 RHBDF2Q6PJF5 856 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 PARD3BQ8TEW8 1205 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 CHD8Q9HCK8 2581 aa21.59■■□□□ 1.05
SSH1-207ENST00000547862 PATE3B3GLJ2 98 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 SGK1O00141 431 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 KLRC4O43908 158 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 ALDH1A2O94788 518 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 FAM163BP0C2L3 166 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 ADORA2BP29275 332 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 MRPS21P82921 87 aaKnown RBP21.58■■□□□ 1.05
SSH1-207ENST00000547862 STK4Q13043 487 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 ANO4Q32M45 955 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 SPOPLQ6IQ16 392 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 PAQR9Q6ZVX9 377 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 RASSF3Q86WH2 238 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 BBS7Q8IWZ6 715 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 PGBD3Q8N328 593 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 IL17RCQ8NAC3 791 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 HMGB4Q8WW32 186 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 OVCA2Q8WZ82 227 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 SNX21Q969T3 373 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 WBP2Q969T9 261 aa21.58■■□□□ 1.05
SSH1-207ENST00000547862 ZFRQ96KR1 1074 aaKnown RBP21.58■■□□□ 1.05
SSH1-207ENST00000547862 VRTNQ9H8Y1 702 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms