RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 KLHL40Q2TBA0 621 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 TPRG1Q6ZUI0 275 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 ENOSF1Q7L5Y1 443 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 PIGZQ86VD9 579 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 FAM81BQ96LP2 452 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 DDX23Q9BUQ8 820 aaKnown RBP19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 SIX2Q9NPC8 291 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 GKN1Q9NS71 199 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 TAB2Q9NYJ8 693 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 HESX1Q9UBX0 185 aa19.76■□□□□ 0.75
PRPF40B-206ENST00000547764 TULP2O00295 520 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 CYP26A1O43174 497 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 KRT5P13647 590 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 CD72P21854 359 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 BRD2P25440 801 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 BCAT1P54687 386 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 ZXDBP98169 803 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 PDE4CQ08493 712 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 USP4Q13107 963 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 HECTD3Q5T447 861 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 LCLAT1Q6UWP7 414 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 TTC16Q8NEE8 873 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 UBA3Q8TBC4 463 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 CSGALNACT1Q8TDX6 532 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 SH3RF2Q8TEC5 729 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 FAM83CQ9BQN1 747 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 FOXQ1Q9C009 403 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 CCSER2Q9H7U1 834 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 TLR8Q9NR97 1041 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 GTSE1Q9NYZ3 720 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 HCN4Q9Y3Q4 1203 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 USP3Q9Y6I4 520 aa19.75■□□□□ 0.75
PRPF40B-206ENST00000547764 TICRRQ7Z2Z1 1910 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 COL4A2P08572 1712 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 KANSL1LA0AUZ9 987 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 SHISA7A6NL88 538 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 XPO1O14980 1071 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 COCHO43405 550 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 MBL2P11226 248 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 TCF3P15923 654 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 TUBP50607 506 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 TNK2Q07912 1038 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 BST2Q10589 180 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 KCNMA1Q12791 1236 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 MTF1Q14872 753 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 NCAPHQ15003 741 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 KRT31Q15323 416 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 CNGA2Q16280 664 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 ARHGAP44Q17R89 818 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 ANO6Q4KMQ2 910 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 PKDCCQ504Y2 493 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 RAB41Q5JT25 222 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 TTC8Q8TAM2 541 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 SMPD4Q9NXE4 827 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 CPQQ9Y646 472 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 PIAS3Q9Y6X2 628 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 F5P12259 2224 aa19.74■□□□□ 0.75
PRPF40B-206ENST00000547764 KMT2EQ8IZD2 1858 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 LEFTY2O00292 366 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 STILQ15468 1287 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 TRIM68Q6AZZ1 485 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 DPY19L2P1Q6NXN4 242 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 CCDC186Q7Z3E2 898 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 VPS16Q9H269 839 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 NMUR1Q9HB89 426 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 OSER1Q9NX31 292 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 DNAJC12Q9UKB3 198 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 AJAP1Q9UKB5 411 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 SIT1Q9Y3P8 196 aa19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 MTF2Q9Y483 593 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-206ENST00000547764 A0A1W2PQH9 124 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 BECN2A8MW95 431 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 TLR5O60602 858 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 SETSIPP0DME0 302 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 GLULP15104 373 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 PTMSP20962 102 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 PLA2G4AP47712 749 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 SOX9P48436 509 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 TKTL1P51854 596 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 KPNA1P52294 538 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 MLLT6P55198 1093 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 UBXN2BQ14CS0 331 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 SCD5Q86SK9 330 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 AOPEPQ8N6M6 819 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 PJA1Q8NG27 643 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 SHC3Q92529 594 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 NAT10Q9H0A0 1025 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 HSD3B7Q9H2F3 369 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 EBF3Q9H4W6 596 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 LTB4R2Q9NPC1 389 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 CYLDQ9NQC7 956 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 KIF26AQ9ULI4 1882 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-206ENST00000547764 MYO16Q9Y6X6 1858 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 HELZP42694 1942 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 FAM170BA6NMN3 283 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms