RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 MRPL1Q9BYD6 325 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TMEM206Q9H813 350 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 RAB20Q9NX57 234 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 MAD1L1Q9Y6D9 718 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CASQ2O14958 399 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 ENTPD3O75355 529 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SORBS2O94875 1100 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 INHBAP08476 426 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SLC5A2P31639 672 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 VCPP55072 806 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 FAAP100Q0VG06 881 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 NFIAQ12857 509 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 TNFAIP1Q13829 316 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 KRT81Q14533 505 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 ANKRD22Q5VYY1 191 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 PPIL6Q8IXY8 311 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 RCOR2Q8IZ40 523 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 USP6NLQ92738 828 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SENP6Q9GZR1 1112 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 PLK2Q9NYY3 685 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 BARX2Q9UMQ3 279 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 TDRKHQ9Y2W6 561 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 PPME1Q9Y570 386 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CCDC195A0A1B0GUA6 201 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 GOLGA8IPA6NC78 632 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 PMM2O15305 246 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 TNFAIP8O95379 198 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 ATP5BP06576 529 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 AOC1P19801 751 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CIITAP33076 1130 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 PHEXP78562 749 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 BTKQ06187 659 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 KRT39Q6A163 491 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SH2D5Q6ZV89 423 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 NCCRP1Q6ZVX7 275 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CCDC127Q96BQ5 260 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 SLITRK1Q96PX8 696 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 WDR83Q9BRX9 315 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 DDX4Q9NQI0 724 aaKnown RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 TBCCD1Q9NVR7 557 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 THEGQ9P2T0 379 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 APPL1Q9UKG1 709 aa11.13□□□□□ -0.63
NPAS3-205ENST00000547068 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-205ENST00000547068 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 EGFRP00533 1210 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 KRT1P04264 644 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 LPIN1Q14693 890 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CNGA3Q16281 694 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 USH1GQ495M9 461 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 OGFRL1Q5TC84 451 aaPredicted RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 LIN9Q5TKA1 542 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 MFSD7Q6UXD7 560 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 POU5F2Q8N7G0 328 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CPT1BQ92523 772 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 SLC35B4Q969S0 331 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 DCUN1D1Q96GG9 259 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 ACCSQ96QU6 501 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 EBF4Q9BQW3 602 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 RMI1Q9H9A7 625 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 FAIMQ9NVQ4 179 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 SORCS3Q9UPU3 1222 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 MYPNQ86TC9 1320 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 BOLA2-SMG1P6H3BVE0 249 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 TLR3O15455 904 aaKnown RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 DNAJA2O60884 412 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PROCP04070 461 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 ITGAVP06756 1048 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 FUT4P22083 530 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 EPHX2P34913 555 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 GPC3P51654 580 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 GABPAQ06546 454 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms