RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 KPNB1Q14974 876 aaKnown RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 DCAF15Q66K64 600 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 ADGRD1Q6QNK2 874 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 ZBTB8OSQ8IWT0 167 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 RIBC1Q8N443 379 aaPredicted RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 CCHCR1Q8TD31 782 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 WDR60Q8WVS4 1066 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 KLRG1Q96E93 195 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 SPATA33Q96N06 139 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 RAB3IPQ96QF0 476 aaPredicted RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 CDT1Q9H211 546 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 ACSS2Q9NR19 701 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 EVPLQ92817 2033 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 ZBTB42B2RXF5 422 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 PIGRP01833 764 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 PTDSS1P48651 473 aaKnown RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 ROR1Q01973 937 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 PTPN11Q06124 597 aaPredicted RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 KRT81Q14533 505 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 SLC25A41Q8N5S1 370 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 MZB1Q8WU39 189 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 NDRG1Q92597 394 aaKnown RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
USP28-214ENST00000545540 NIFKQ9BYG3 293 aaKnown RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 RPF1Q9H9Y2 349 aaKnown RBP15.69■□□□□ 0.1
USP28-214ENST00000545540 A0A087WZ62 844 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 ENO4A6NNW6 628 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 ABLIM1O14639 778 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 MAGEB2O15479 319 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 TRUB2O95900 331 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 KRT7P08729 469 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 TPBGLP0DKB5 382 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 TROVE2P10155 538 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP28-214ENST00000545540 TUBP50607 506 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 ZNF200P98182 395 aaPredicted RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 GLRA4Q5JXX5 417 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 C16orf46Q6P387 395 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 CLEC4CQ8WTT0 213 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 FDXACB1Q9BRP7 624 aaPredicted RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 YIPF3Q9GZM5 350 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 NMUR2Q9GZQ4 415 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 RNPEPL1Q9HAU8 725 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 SMYD2Q9NRG4 433 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 MRPL42Q9Y6G3 142 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 ENO1P06733 434 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 LRRC38Q5VT99 294 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 DRICH1Q6PGQ1 229 aaPredicted RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 TDRPQ86YL5 185 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 SLC24A2Q9UI40 661 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 HES2Q9Y543 173 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 GYG2O15488 501 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 LSM8O95777 96 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 STAG3L1P0CL83 205 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 NDST1P52848 882 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 Q3C1V9 767 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 FAM183BPQ6ZVS7 135 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 ARID3BQ8IVW6 561 aaPredicted RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 NAF1Q96HR8 494 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 TRIM55Q9BYV6 548 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 IQCGQ9H095 443 aaKnown RBP15.68■□□□□ 0.1
USP28-214ENST00000545540 PCMTD2Q9NV79 361 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 ADAMTS5Q9UNA0 930 aa15.68■□□□□ 0.1
USP28-214ENST00000545540 PPEF2O14830 753 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 HAUS5O94927 633 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 CALB2P22676 271 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 CCDC6Q16204 474 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 CCDC142Q17RM4 750 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 CTC1Q2NKJ3 1217 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 MPZL3Q6UWV2 235 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 ACOT1Q86TX2 421 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 SRPK1Q96SB4 655 aaKnown RBP15.67■□□□□ 0.1
USP28-214ENST00000545540 CYTH2Q99418 400 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 C20orf27Q9GZN8 174 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 TMEM134Q9H6X4 195 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 KCNK13Q9HB14 408 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 TMPRSS4Q9NRS4 437 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 MAP3K13O43283 966 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 OLIG2Q13516 323 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 RCN1Q15293 331 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 CES3Q6UWW8 571 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 STK32AQ8WU08 396 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 TXNRD2Q9NNW7 524 aa15.67■□□□□ 0.1
USP28-214ENST00000545540 ZWINTO95229 277 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 GTF2A2P52657 109 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 RABGGTBP53611 331 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 ZNF280AP59817 542 aaPredicted RBP15.66■□□□□ 0.1
USP28-214ENST00000545540 VGLL4Q14135 290 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 CASC4Q6P4E1 433 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 HACE1Q8IYU2 909 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 ATXN7L3BQ96GX2 97 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 CLMNQ96JQ2 1002 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 CYLDQ9NQC7 956 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 ZC3H7BQ9UGR2 993 aaKnown RBP15.66■□□□□ 0.1
USP28-214ENST00000545540 TSPAN16Q9UKR8 245 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 APOC4-APOC2K7ER74 178 aa15.66■□□□□ 0.1
USP28-214ENST00000545540 PRPSAP2O60256 369 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms